RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 CRABP1P29762 137 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 PYCR1P32322 319 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 TGFBR2P37173 567 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 GUCA1AP43080 201 aaPredicted RBP3.35□□□□□ -1.87
VPS52-222ENST00000495981 ARF6P62330 175 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 ECH1Q13011 328 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 RIGQ13278 110 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 EXOSC2Q13868 293 aaKnown RBP3.35□□□□□ -1.87
VPS52-222ENST00000495981 P2RY14Q15391 338 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 MAPRE2Q15555 327 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 DGUOKQ16854 277 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 FAM106AQ4KMX7 169 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 SMUG1Q53HV7 270 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 LDLRAD2Q5SZI1 272 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 LINC01590Q5TEZ4 76 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 HACD2Q6Y1H2 254 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 Q6ZRG5 221 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 TCF23Q7RTU1 214 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 Q8N2B8 174 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 LINC00469Q8N7U9 141 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 OR1M1Q8NGA1 313 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 OR4Q3Q8NH05 313 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 OR4K13Q8NH42 304 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 ZNF671Q8TAW3 534 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 MUC7Q8TAX7 377 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 PIFOQ8TCI5 191 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 SPRYD4Q8WW59 207 aaPredicted RBP3.35□□□□□ -1.87
VPS52-222ENST00000495981 DYDC1Q8WWB3 177 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 ERMAPQ96PL5 475 aaPredicted RBP3.35□□□□□ -1.87
VPS52-222ENST00000495981 AMELYQ99218 206 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 CCL13Q99616 98 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 PITX2Q99697 317 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 B9D2Q9BPU9 175 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 SLC22A4Q9H015 551 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 WDR13Q9H1Z4 485 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 PPA2Q9H2U2 334 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 SLC25A19Q9HC21 320 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 CDH10Q9Y6N8 788 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 DNAH17Q9UFH2 4485 aa3.35□□□□□ -1.87
VPS52-222ENST00000495981 IGKV1D-17A0A075B6S4 117 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 A0A1W2PRD5 423 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 A0A1W2PRF3 423 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 A0A1W2PRM7 423 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 DHRS12A0PJE2 317 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 TVP23AA6NH52 213 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 ZNF878C9JN71 531 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 CASQ2O14958 399 aaPredicted RBP3.34□□□□□ -1.87
VPS52-222ENST00000495981 XRCC2O43543 280 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 NDUFA2O43678 99 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 ZNF254O75437 659 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 RENP00797 406 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 FCER2P06734 321 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 SLC2A2P11168 524 aaPredicted RBP3.34□□□□□ -1.87
VPS52-222ENST00000495981 IGLL1P15814 213 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 MUC1P15941 1255 aaPredicted RBP3.34□□□□□ -1.87
VPS52-222ENST00000495981 H2AFXP16104 143 aaPredicted RBP3.34□□□□□ -1.87
VPS52-222ENST00000495981 RPL35AP18077 110 aaKnown RBP3.34□□□□□ -1.87
VPS52-222ENST00000495981 AADACP22760 399 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 IFNA8P32881 189 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 OPRL1P41146 370 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 TGM4P49221 684 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 CX3CR1P49238 355 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 NUDT2P50583 147 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 UBE2E1P51965 193 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 CAV3P56539 151 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 FAM3AP98173 230 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 MRPL28Q13084 256 aaKnown RBP3.34□□□□□ -1.87
VPS52-222ENST00000495981 CRMP1Q14194 572 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 AANATQ16613 207 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 LRRC75BQ2VPJ9 315 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 TTC23Q5W5X9 447 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 ZFAND6Q6FIF0 208 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 THOC7Q6I9Y2 204 aaKnown RBP3.34□□□□□ -1.87
VPS52-222ENST00000495981 SLC35E4Q6ICL7 350 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 STEAP1BQ6NZ63 245 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 DCXRQ7Z4W1 244 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 CYP4Z1Q86W10 505 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 C11orf42Q8N5U0 333 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 CYB561A3Q8NBI2 242 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 OR9Q2Q8NGE9 314 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 OR51L1Q8NGJ5 315 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 OR4C13Q8NGP0 309 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 OR9Q1Q8NGQ5 310 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 OR13A1Q8NGR1 328 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 ANGPTL6Q8NI99 470 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 GIPC3Q8TF64 312 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 NPRL2Q8WTW4 380 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 RNF133Q8WVZ7 376 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 RORBQ92753 470 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 SPTSSAQ969W0 71 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 SLAMF6Q96DU3 332 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 UHRF2Q96PU4 802 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 KCTD14Q9BQ13 255 aaPredicted RBP3.34□□□□□ -1.87
VPS52-222ENST00000495981 OVOL2Q9BRP0 275 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 COPS4Q9BT78 406 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 PAPOLGQ9BWT3 736 aaKnown RBP3.34□□□□□ -1.87
VPS52-222ENST00000495981 MAGT1Q9H0U3 335 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 DNTTIP1Q9H147 329 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 MMP28Q9H239 520 aa3.34□□□□□ -1.87
VPS52-222ENST00000495981 METTL8Q9H825 291 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms