RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 POTEKPQ9BYX7 375 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 SRRQ9GZT4 340 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 FAM60AQ9NP50 221 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 OR2S2Q9NQN1 319 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 DAZ1Q9NQZ3 744 aaKnown RBP3.16□□□□□ -1.9
CCDC39-207ENST00000495817 BCL9O00512 1426 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 PPIP5K1Q6PFW1 1433 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 DOT1LQ8TEK3 1739 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 COL1A2P08123 1366 aa3.15□□□□□ -1.9
CCDC39-207ENST00000495817 EIF3AQ14152 1382 aaKnown RBP3.15□□□□□ -1.9
CCDC39-207ENST00000495817 PCNTO95613 3336 aa3.15□□□□□ -1.9
CCDC39-207ENST00000495817 A0A1B0GXF2 115 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 GOLGA8IPA6NC78 632 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 UBDO15205 165 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 GYG2O15488 501 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 CRXO43186 299 aaPredicted RBP3.15□□□□□ -1.91
CCDC39-207ENST00000495817 COX7A2P2O60397 106 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 SHOX2O60902 331 aaPredicted RBP3.15□□□□□ -1.91
CCDC39-207ENST00000495817 SCN2BO60939 215 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 BRI3O95415 125 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 CXorf1O96002 111 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 HLA-DRAP01903 254 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 CECR9P0C854 216 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 PSMB6P28072 239 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 IMPA1P29218 277 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 CD40LGP29965 261 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 SLC6A1P30531 599 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 CCL23P55773 120 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 CD164Q04900 197 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 BAXQ07812 192 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 FADDQ13158 208 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 TRAM1Q15629 374 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 TRIP13Q15645 432 aaPredicted RBP3.15□□□□□ -1.91
CCDC39-207ENST00000495817 UBE2NLQ5JXB2 153 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 CLVS2Q5SYC1 327 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 ZFAND6Q6FIF0 208 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 LINC00596Q86U02 117 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 OR7G1Q8NGA0 311 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 IFT81Q8WYA0 676 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 PPP1R36Q96LQ0 422 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 PITX2Q99697 317 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 INIPQ9NRY2 104 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 MS4A12Q9NXJ0 267 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 SCML1Q9UN30 329 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 ZNF780BQ9Y6R6 833 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 QSER1Q2KHR3 1735 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 RGPD5Q99666 1765 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 DYSFO75923 2080 aa3.15□□□□□ -1.91
CCDC39-207ENST00000495817 TAF1LQ8IZX4 1826 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 FAM208AQ9UK61 1670 aaKnown RBP3.14□□□□□ -1.91
CCDC39-207ENST00000495817 C1orf232A0A0U1RR37 186 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 ZNF233A6NK53 670 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 GOLGA8RI6L899 631 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 GPR171O14626 319 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 FFAR1O14842 300 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 ZNF189O75820 626 aaPredicted RBP3.14□□□□□ -1.91
CCDC39-207ENST00000495817 CNMDO75829 334 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 NRASP01111 189 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 HRASP01112 189 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 KRASP01116 189 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 ACOT2P49753 483 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 RBX1P62877 108 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 FAM53BQ14153 422 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 CASP8Q14790 479 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 IGFBP7Q16270 282 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 CEACAM21Q3KPI0 293 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 TMEM31Q5JXX7 168 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 USP50Q70EL3 339 aaPredicted RBP3.14□□□□□ -1.91
CCDC39-207ENST00000495817 AHSA2Q719I0 299 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 SMIM5Q71RC9 77 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 FA2HQ7L5A8 372 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 STX12Q86Y82 276 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 TMEM25Q86YD3 366 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 PLCZ1Q86YW0 608 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 ITLN2Q8WWU7 325 aaPredicted RBP3.14□□□□□ -1.91
CCDC39-207ENST00000495817 OR5P2Q8WZ92 322 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 CCL17Q92583 94 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 SERPINB11Q96P15 392 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 DHX35Q9H5Z1 703 aaKnown RBP3.14□□□□□ -1.91
CCDC39-207ENST00000495817 TMEM38BQ9NVV0 291 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 NKIRAS1Q9NYS0 192 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 PUS1Q9Y606 427 aaKnown RBP eCLIP3.14□□□□□ -1.91
CCDC39-207ENST00000495817 CICQ96RK0 1608 aaPredicted RBP3.14□□□□□ -1.91
CCDC39-207ENST00000495817 VIRMAQ69YN4 1812 aaKnown RBP3.14□□□□□ -1.91
CCDC39-207ENST00000495817 GPR179Q6PRD1 2367 aa3.14□□□□□ -1.91
CCDC39-207ENST00000495817 KIAA1551Q9HCM1 1747 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 PGPA6NDG6 321 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 OR6C70A6NIJ9 312 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 TMEM210A6NLX4 147 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 OR5K4A6NMS3 321 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 K7EPK0 472 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 TOR1AO14656 332 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 SGCEO43556 437 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 KCNK2O95069 426 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 MLNP12872 115 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 ELK4P28324 431 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 LGALS7P47929 136 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 UBE2G2P60604 165 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 POLR2GP62487 172 aaKnown RBP eCLIP3.13□□□□□ -1.91
CCDC39-207ENST00000495817 PMS2P3Q13401 168 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms