RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 TOMM40LQ969M1 308 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 METTL8Q9H825 291 aaKnown RBP13.7□□□□□ -0.22
CBX4-204ENST00000495122 SLC2A9Q9NRM0 540 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 WIPI2Q9Y4P8 454 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 FAM25EA8MYX2 175 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 CCSO14618 274 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 HAND1O96004 215 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 GRPP07492 148 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 PI3P19957 117 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 PTAFRP25105 342 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 SLC35E4Q6ICL7 350 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 TRAT1Q6PIZ9 186 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 TMEM108Q6UXF1 575 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 WDR82Q6UXN9 313 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 ACP7Q6ZNF0 438 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 Q6ZR03 302 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 C11orf53Q8IXP5 236 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 LGI3Q8N145 548 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 ZNF565Q8N9K5 539 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 INO80EQ8NBZ0 244 aaPredicted RBP13.69□□□□□ -0.22
CBX4-204ENST00000495122 FAM216AQ8WUB2 273 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 RDH5Q92781 318 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 MBD6Q96DN6 1003 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 KIRREL1Q96J84 757 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 TMUB1Q9BVT8 246 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 ARL6Q9H0F7 186 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 MBNL3Q9NUK0 354 aaKnown RBP13.69□□□□□ -0.22
CBX4-204ENST00000495122 TAAR3PQ9P1P4 343 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 ARID1AO14497 2285 aa13.69□□□□□ -0.22
CBX4-204ENST00000495122 TMEM30CPA0ZSE6 113 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 H0YL77 283 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 GPR31O00270 319 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 HS3ST1O14792 307 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 NUP62P37198 522 aaPredicted RBP13.68□□□□□ -0.22
CBX4-204ENST00000495122 HTR2BP41595 481 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 GATA4P43694 442 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 AP2S1P53680 142 aaPredicted RBP13.68□□□□□ -0.22
CBX4-204ENST00000495122 RAB14P61106 215 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 UBA52P62987 128 aaKnown RBP13.68□□□□□ -0.22
CBX4-204ENST00000495122 TMEM187Q14656 261 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 CLLU1Q5K131 121 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 PRSS54Q6PEW0 395 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 LIAT1Q6ZQX7 453 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 LDLRAD3Q86YD5 345 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 TGIF2LYQ8IUE0 185 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 CMTM1Q8IZ96 169 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 OR5T2Q8NGG2 359 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 ERGIC1Q969X5 290 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 PLEKHF2Q9H8W4 249 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 NGBQ9NPG2 151 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 DNAJB11Q9UBS4 358 aa13.68□□□□□ -0.22
CBX4-204ENST00000495122 C13orf42A0A1B0GVH6 325 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 A0A1W2PPR1 153 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 A6NLC8 198 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 CD40P25942 277 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 DUSP1P28562 367 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 FXYD4P59646 89 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 IL15RAQ13261 267 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 EXOSC2Q13868 293 aaKnown RBP13.67□□□□□ -0.22
CBX4-204ENST00000495122 HMGN3Q15651 99 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 IGSF11Q5DX21 431 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 H1FOOQ8IZA3 346 aaPredicted RBP13.67□□□□□ -0.22
CBX4-204ENST00000495122 BATF2Q8N1L9 274 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 OR10J5Q8NHC4 309 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 TMEM171Q8WVE6 324 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 IL22RA2Q969J5 263 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 SEC22AQ96IW7 307 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 DIRC2Q96SL1 478 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 OR2W1Q9Y3N9 320 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 TMED3Q9Y3Q3 217 aa13.67□□□□□ -0.22
CBX4-204ENST00000495122 KANTRA0A1W2PQU2 76 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 LINC00862A6NCI5 91 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 SIRPB1O00241 398 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 BCL2L11O43521 198 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 SCTP09683 121 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 CD99P14209 185 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 CCKARP32238 428 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 HERPUD1Q15011 391 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 MSMO1Q15800 293 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 C6orf183Q5T699 404 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 PPP1R35Q8TAP8 253 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 SCARB1Q8WTV0 552 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 PHYHIPLQ96FC7 376 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 AKR1E2Q96JD6 320 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 TOLLIPQ9H0E2 274 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 KCNIP1Q9NZI2 227 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 ZDHHC8Q9ULC8 765 aa13.66□□□□□ -0.22
CBX4-204ENST00000495122 NIPBLQ6KC79 2804 aaeCLIP13.66□□□□□ -0.22
CBX4-204ENST00000495122 VSTM5A8MXK1 200 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 SRRM5B3KS81 715 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 BET1O15155 118 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 MPPED1O15442 326 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 ADH4P08319 380 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 TNFSF4P23510 183 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 FAM27E3Q08E93 113 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 SMCO1Q147U7 214 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 MRPL24Q96A35 216 aaKnown RBP13.65□□□□□ -0.22
CBX4-204ENST00000495122 ABHD14BQ96IU4 210 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 C18orf12Q96KH6 178 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 SPIN2AQ99865 258 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms