RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 LPAR5Q9H1C0 372 aa12.87□□□□□ -0.35
LIME1-209ENST00000494776 OR51E2Q9H255 320 aa12.87□□□□□ -0.35
LIME1-209ENST00000494776 CHMP1AQ9HD42 196 aaPredicted RBP12.87□□□□□ -0.35
LIME1-209ENST00000494776 PSG11Q9UQ72 335 aa12.87□□□□□ -0.35
LIME1-209ENST00000494776 LOC100506127A0A0U1RQW1 187 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 SHISA3A0PJX4 238 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 SMIM30A4D0T7 59 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 IFITM5A6NNB3 132 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 C12orf77C9JDV5 145 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 C15orf65H3BRN8 121 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 CD36P16671 472 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 RCC1P18754 421 aaPredicted RBP12.86□□□□□ -0.35
LIME1-209ENST00000494776 BRS3P32247 399 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 VEGFCP49767 419 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 UTF1Q5T230 341 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 OR52M1Q8NGK5 317 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 OR10X1Q8NGY0 326 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 PIFOQ8TCI5 191 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 RPEQ96AT9 228 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 KCTD7Q96MP8 289 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 GNG12Q9UBI6 72 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 PITPNC1Q9UKF7 332 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 RAB22AQ9UL26 194 aa12.86□□□□□ -0.35
LIME1-209ENST00000494776 A0A0A6YYD4 124 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 IGHV3-43A0A0B4J1X8 118 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 TMEM272A0A1B0GTI8 110 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 CLPSL1A2RUU4 121 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 SOCS1O15524 211 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 HBZP02008 142 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 IGHV3-43DP0DP04 118 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 JUNBP17275 347 aaPredicted RBP12.85□□□□□ -0.35
LIME1-209ENST00000494776 MNDAP41218 407 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 DYNLT3P51808 116 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 TPTE2P1Q5T6R2 138 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 OLFML2AQ68BL7 652 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 CCDC144NLQ6NUI1 221 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 Q6ZSV7 163 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 TPRA1Q86W33 373 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 GAPTQ8N292 157 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 OR56B1Q8NGI3 324 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 SETD6Q8TBK2 473 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 MRPL30Q8TCC3 161 aaKnown RBP12.85□□□□□ -0.35
LIME1-209ENST00000494776 TOMM40LQ969M1 308 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 ZNF747Q9BV97 191 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 LIN7BQ9HAP6 207 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 TAF9BQ9HBM6 251 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 GFOD1Q9NXC2 390 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 FBLN5Q9UBX5 448 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 TCF19Q9Y242 345 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 RNF114Q9Y508 228 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 MMP24Q9Y5R2 645 aa12.85□□□□□ -0.35
LIME1-209ENST00000494776 A0A1W2PPE3 182 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 OOSP1A8MZH6 123 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 GADD45AP24522 165 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 MADCAM1Q13477 382 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 TMEM30BQ3MIR4 351 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 Q6ZTK2 550 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 TMEM219Q86XT9 240 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 FAM89BQ8N5H3 189 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 OR4C13Q8NGP0 309 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 OR1L1Q8NH94 360 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 CYYR1Q96J86 154 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 NPFFR1Q9GZQ6 430 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 ABRACLQ9P1F3 81 aa12.84□□□□□ -0.35
LIME1-209ENST00000494776 NOTOA8MTQ0 251 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 LOXL3P58215 753 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 MRPS15P82914 257 aaKnown RBP12.83□□□□□ -0.36
LIME1-209ENST00000494776 MXD1Q05195 221 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 TIMM50Q3ZCQ8 353 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 SHISA2Q6UWI4 295 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 ZNF554Q86TJ5 538 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 OR10V1Q8NGI7 309 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 LINC01006Q8NI28 216 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 CAPSLQ8WWF8 208 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 RIMS4Q9H426 269 aaPredicted RBP12.83□□□□□ -0.36
LIME1-209ENST00000494776 C16orf95Q9H693 158 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 ZNF696Q9H7X3 374 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 OR2S2Q9NQN1 319 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 MBNL3Q9NUK0 354 aaKnown RBP12.83□□□□□ -0.36
LIME1-209ENST00000494776 HSF4Q9ULV5 492 aa12.83□□□□□ -0.36
LIME1-209ENST00000494776 A0A0B4J203 849 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 METTL21EPA6NDL7 271 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 A6NDX4 124 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 LY6LH3BQJ8 138 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 LDLRAD4O15165 306 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 CHST1O43916 411 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 TSPAN9O75954 239 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 SLC2A2P11168 524 aaPredicted RBP12.82□□□□□ -0.36
LIME1-209ENST00000494776 CD24P25063 80 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 IL3RAP26951 378 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 SDC2P34741 201 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 PLA2G7Q13093 441 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 CCBE1Q6UXH8 406 aaPredicted RBP12.82□□□□□ -0.36
LIME1-209ENST00000494776 NR2C2APQ86WQ0 139 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 DTX3Q8N9I9 347 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 GALMQ96C23 342 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 ARHGAP5-AS1Q96IT6 56 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 PECRQ9BY49 303 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 AK3Q9UIJ7 227 aa12.82□□□□□ -0.36
LIME1-209ENST00000494776 DAPK2Q9UIK4 370 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms