RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TMEM210A6NLX4 147 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 AP4M1O00189 453 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 ADAM20O43506 726 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 SSSCA1O60232 199 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 MBP02144 154 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 CCL4P13236 92 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 NPBWR2P48146 333 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 LHX2P50458 406 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 ARF1P84077 181 aaKnown RBP9.83□□□□□ -0.84
RFC4-214ENST00000494047 CLN3Q13286 438 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 GABRA6Q16445 453 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 TSPO2Q5TGU0 170 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 CALHM1Q8IU99 346 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 GAPTQ8N292 157 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 RNASE11Q8TAA1 199 aaKnown RBP9.83□□□□□ -0.84
RFC4-214ENST00000494047 CT55Q8WUE5 264 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 OR5P3Q8WZ94 311 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 BTF3L4Q96K17 158 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 CLCC1Q96S66 551 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 SCRT1Q9BWW7 348 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 TMPRSS5Q9H3S3 457 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 AKIRIN1Q9H9L7 192 aaPredicted RBP9.83□□□□□ -0.84
RFC4-214ENST00000494047 TIMM9Q9Y5J7 89 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 ZFYVE26Q68DK2 2539 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 C5orf49A4QMS7 147 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 CD300LBA8K4G0 201 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 C9orf172C9J069 976 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 G3V3Y1 287 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 KLRC4-KLRK1H3BQV0 150 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 MASP2O00187 686 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 SIGLEC5O15389 551 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 OR2C1O95371 312 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 BCL3P20749 454 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 NFYBP25208 207 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 S100PP25815 95 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 CLDN18P56856 261 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 NHLH2Q02577 135 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 TGFBR3Q03167 851 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 ATP6V1FQ16864 119 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 KRBOX4Q5JUW0 171 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 ZNF818PQ6ZRF7 136 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 DTX1Q86Y01 620 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 FAM58AQ8N1B3 248 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 ABHD3Q8WU67 409 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 FER1L6-AS2Q96M78 137 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 CTDSP1Q9GZU7 261 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 WFDC1Q9HC57 220 aa9.82□□□□□ -0.84
RFC4-214ENST00000494047 CACNA1GO43497 2377 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 SDK2Q58EX2 2172 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 ELOA3CA0A087WX78 387 aaPredicted RBP9.81□□□□□ -0.84
RFC4-214ENST00000494047 IGSF23A1L1A6 192 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 PGLYRP1O75594 196 aaPredicted RBP9.81□□□□□ -0.84
RFC4-214ENST00000494047 F12P00748 615 aaPredicted RBP9.81□□□□□ -0.84
RFC4-214ENST00000494047 GPM6AP51674 278 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 POLR2GP62487 172 aaKnown RBP eCLIP9.81□□□□□ -0.84
RFC4-214ENST00000494047 MZT1Q08AG7 82 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 TBC1D28Q2M2D7 210 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 IGSF11Q5DX21 431 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 ZNF468Q5VIY5 522 aaPredicted RBP9.81□□□□□ -0.84
RFC4-214ENST00000494047 TRAT1Q6PIZ9 186 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 RBMS3Q6XE24 437 aaKnown RBP9.81□□□□□ -0.84
RFC4-214ENST00000494047 CPEB3Q8NE35 698 aaKnown RBP9.81□□□□□ -0.84
RFC4-214ENST00000494047 OR10V1Q8NGI7 309 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 OR11L1Q8NGX0 322 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 MRPL30Q8TCC3 161 aaKnown RBP9.81□□□□□ -0.84
RFC4-214ENST00000494047 POM121L2Q96KW2 1035 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 SIGLEC12Q96PQ1 595 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 CIB3Q96Q77 187 aaPredicted RBP9.81□□□□□ -0.84
RFC4-214ENST00000494047 USB1Q9BQ65 265 aaKnown RBP9.81□□□□□ -0.84
RFC4-214ENST00000494047 CISD1Q9NZ45 108 aaKnown RBP9.81□□□□□ -0.84
RFC4-214ENST00000494047 ZDHHC8Q9ULC8 765 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 CFAP47Q6ZTR5 3102 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 ZFHX4Q86UP3 3567 aa9.81□□□□□ -0.84
RFC4-214ENST00000494047 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.8□□□□□ -0.84
RFC4-214ENST00000494047 FAM24AA6NFZ4 105 aa9.8□□□□□ -0.84
RFC4-214ENST00000494047 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.8□□□□□ -0.84
RFC4-214ENST00000494047 K7ENP7 123 aa9.8□□□□□ -0.84
RFC4-214ENST00000494047 TXNL1O43396 289 aa9.8□□□□□ -0.84
RFC4-214ENST00000494047 IGHV2-5P01817 119 aa9.8□□□□□ -0.84
RFC4-214ENST00000494047 DYNLT3P51808 116 aa9.8□□□□□ -0.84
RFC4-214ENST00000494047 UBE2KP61086 200 aa9.8□□□□□ -0.84
RFC4-214ENST00000494047 CATR1Q13166 79 aa9.8□□□□□ -0.84
RFC4-214ENST00000494047 INO80CQ6PI98 192 aaPredicted RBP9.8□□□□□ -0.84
RFC4-214ENST00000494047 WDR31Q8NA23 367 aa9.8□□□□□ -0.84
RFC4-214ENST00000494047 THOC3Q96J01 351 aaKnown RBP9.8□□□□□ -0.84
RFC4-214ENST00000494047 ESRP2Q9H6T0 727 aaKnown RBP9.8□□□□□ -0.84
RFC4-214ENST00000494047 SEBOXQ9HB31 216 aaPredicted RBP9.8□□□□□ -0.84
RFC4-214ENST00000494047 FOXJ2Q9P0K8 574 aa9.8□□□□□ -0.84
RFC4-214ENST00000494047 FBXO7Q9Y3I1 522 aa9.8□□□□□ -0.84
RFC4-214ENST00000494047 RNF115Q9Y4L5 304 aa9.8□□□□□ -0.84
RFC4-214ENST00000494047 ZNF891A8MT65 544 aaPredicted RBP9.79□□□□□ -0.84
RFC4-214ENST00000494047 SYNGR2O43760 224 aa9.79□□□□□ -0.84
RFC4-214ENST00000494047 RFPL3SP0C7P2 107 aa9.79□□□□□ -0.84
RFC4-214ENST00000494047 SNRPEP62304 92 aaKnown RBP9.79□□□□□ -0.84
RFC4-214ENST00000494047 IGFBP7Q16270 282 aa9.79□□□□□ -0.84
RFC4-214ENST00000494047 ZNF324BQ6AW86 544 aaPredicted RBP9.79□□□□□ -0.84
RFC4-214ENST00000494047 HEPN1Q6WQI6 88 aa9.79□□□□□ -0.84
RFC4-214ENST00000494047 C1orf87Q8N0U7 546 aa9.79□□□□□ -0.84
RFC4-214ENST00000494047 MBD3L1Q8WWY6 194 aa9.79□□□□□ -0.84
RFC4-214ENST00000494047 SH3BGRL3Q9H299 93 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms