RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 IFNA6P05013 189 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 CTXN2P0C2S0 81 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 OR5H8P0DN80 308 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 C17orf58Q2M2W7 97 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 IGSF11Q5DX21 431 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 TMEM200BQ69YZ2 307 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 PRSS57Q6UWY2 283 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 ZNF782Q6ZMW2 699 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-231ENST00000494043 PRR18Q8N4B5 295 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 ARRDC1Q8N5I2 433 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 OR51S1Q8NGJ8 323 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 UBALD1Q8TB05 177 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 ARL11Q969Q4 196 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 SLC6A7Q99884 636 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 LINC00574Q9H8X3 128 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 RAB9BQ9NP90 201 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 SLC2A8Q9NY64 477 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 TAS2R3Q9NYW6 316 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 RPUSD1Q9UJJ7 312 aaKnown RBP9.41□□□□□ -0.9
MCF2L-231ENST00000494043 NBPF19A0A087WUL8 3843 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 MAP1AP78559 2803 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-231ENST00000494043 LOC105371242A0A075B767 164 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 TRBV6-7A0A0A0MS04 114 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 F2RL2O00254 374 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 HEXAP06865 529 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 SLC6A1P30531 599 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 IL2RGP31785 369 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 TSPAN5P62079 268 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 CD276Q5ZPR3 534 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 NRARPQ7Z6K4 114 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 TMEM17Q86X19 198 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 KRTAP1-3Q8IUG1 177 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 LY6G5BQ8NDX9 201 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 ENKURQ8TC29 256 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 IL1F10Q8WWZ1 152 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 GALMQ96C23 342 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 ZNF714Q96N38 554 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 PRRT1Q99946 306 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 GINS4Q9BRT9 223 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 GAL3ST2Q9H3Q3 398 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 OR1A1Q9P1Q5 309 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 SCP2D1Q9UJQ7 156 aa9.4□□□□□ -0.9
MCF2L-231ENST00000494043 MALRD1Q5VYJ5 2156 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 A0A096LNT2 108 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 PPIAL4CA0A0B4J2A2 164 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 FAM240BA0A1B0GVZ2 78 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 ZNF728P0DKX0 622 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 PPIAL4GP0DN37 164 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 CCL3L1P16619 93 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 USF1P22415 310 aaPredicted RBP9.39□□□□□ -0.91
MCF2L-231ENST00000494043 ZFP36P26651 326 aaKnown RBP9.39□□□□□ -0.91
MCF2L-231ENST00000494043 CCR6P51684 374 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 DLX6P56179 175 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 HTD2P86397 168 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 TMEM30BQ3MIR4 351 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 SCGB2B2Q4G0G5 96 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 PLA1AQ53H76 456 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 ZNF660Q6AZW8 331 aaPredicted RBP9.39□□□□□ -0.91
MCF2L-231ENST00000494043 DHRS11Q6UWP2 260 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 IDO2Q6ZQW0 420 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 LHFPL1Q86WI0 220 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 H1FOOQ8IZA3 346 aaPredicted RBP9.39□□□□□ -0.91
MCF2L-231ENST00000494043 OR10J5Q8NHC4 309 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 RFESDQ8TAC1 157 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 DPAGT1Q9H3H5 408 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 OCEL1Q9H607 264 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 IDI2-AS1Q9NZ38 188 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 ZNF69Q9UC07 566 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 SLC23A1Q9UHI7 598 aa9.39□□□□□ -0.91
MCF2L-231ENST00000494043 MAST4O15021 2626 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 DSCAML1Q8TD84 2053 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 A0A1W2PPH5 198 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 FAM157AC9JC47 383 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 HSPA12AO43301 675 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 ENSAO43768 121 aaKnown RBP9.38□□□□□ -0.91
MCF2L-231ENST00000494043 FOXH1O75593 365 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 TUSC2O75896 110 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 LIPFP07098 398 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 SPNP16150 400 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 NFYAP23511 347 aaPredicted RBP9.38□□□□□ -0.91
MCF2L-231ENST00000494043 OMGP23515 440 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 ZBTB25P24278 435 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 FPR2P25090 351 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 FCGR2CP31995 323 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 LCN2P80188 198 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 PAX2Q02962 417 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 GNMTQ14749 295 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 OXA1LQ15070 435 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 RBMS2Q15434 407 aaKnown RBP9.38□□□□□ -0.91
MCF2L-231ENST00000494043 TRIM16LQ309B1 348 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 PRAMEF5Q5TYX0 476 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 HEPN1Q6WQI6 88 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 GLCCI1Q86VQ1 547 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 MINDY2Q8NBR6 621 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 DUSP18Q8NEJ0 188 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 OR10A7Q8NGE5 316 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 OR52L2PQ8NGH6 319 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 OR13C8Q8NGS7 320 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 OR6F1Q8NGZ6 308 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 TERB2Q8NHR7 220 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms