RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 GSKIPQ9P0R6 139 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 GLS2Q9UI32 602 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 DUSP13Q9UII6 198 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 TMEM56-RWDD3S4R434 201 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 CADP27708 2225 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 CFAP47Q6ZTR5 3102 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 IGKV1D-17A0A075B6S4 117 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 DUXBA0A1W2PPF3 345 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 C12orf77C9JDV5 145 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 K7EPK0 472 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 IFNL4K9M1U5 179 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 SPRY3O43610 288 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 ZNF737O75373 536 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 SCGB1D2O95969 90 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 IGHV1-46P01743 117 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 MBPP02686 304 aaPredicted RBP8.93□□□□□ -0.98
CLCN6-208ENST00000494028 CD80P33681 288 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 GATA4P43694 442 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 RAB14P61106 215 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 GNMTQ14749 295 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 ESCO2Q56NI9 601 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 TOR2AQ5JU69 321 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 TMEM108Q6UXF1 575 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 MOGAT3Q86VF5 341 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 SELENOHQ8IZQ5 122 aaKnown RBP8.93□□□□□ -0.98
CLCN6-208ENST00000494028 FAM71E2Q8N5Q1 922 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 OR52M1Q8NGK5 317 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 OR5D13Q8NGL4 314 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 OR1L1Q8NH94 360 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 IL22RA2Q969J5 263 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 PHYHIPLQ96FC7 376 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 CITED4Q96RK1 184 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 SEBOXQ9HB31 216 aaPredicted RBP8.93□□□□□ -0.98
CLCN6-208ENST00000494028 CYTL1Q9NRR1 136 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 TMED3Q9Y3Q3 217 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 LSM5Q9Y4Y9 91 aaKnown RBP8.93□□□□□ -0.98
CLCN6-208ENST00000494028 ITPR1Q14643 2758 aa8.93□□□□□ -0.98
CLCN6-208ENST00000494028 PLCE1Q9P212 2302 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 DPRXA6NFQ7 191 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 F5H0A9 414 aaPredicted RBP8.92□□□□□ -0.98
CLCN6-208ENST00000494028 TNFSF12O43508 249 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 PGLYRP1O75594 196 aaPredicted RBP8.92□□□□□ -0.98
CLCN6-208ENST00000494028 CDS2O95674 445 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 IGLV2-14P01704 120 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 HKR1P10072 659 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 RRASP10301 218 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 PSG2P11465 335 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 GABRA2P47869 451 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 AESQ08117 197 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 SMCO1Q147U7 214 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 NMSQ5H8A3 153 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 FAM74A1Q5RGS3 127 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 PRR18Q8N4B5 295 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 OR13A1Q8NGR1 328 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 C5orf30Q96GV9 206 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 VKORC1Q9BQB6 163 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 TOLLIPQ9H0E2 274 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 SHARPINQ9H0F6 387 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 C11orf1Q9H5F2 150 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 MED9Q9NWA0 146 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 ZDHHC8Q9ULC8 765 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 KCNS2Q9ULS6 477 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 RCL1Q9Y2P8 373 aaKnown RBP8.92□□□□□ -0.98
CLCN6-208ENST00000494028 UBE2J1Q9Y385 318 aaPredicted RBP8.92□□□□□ -0.98
CLCN6-208ENST00000494028 POMT1Q9Y6A1 747 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 DSCAMO60469 2012 aa8.92□□□□□ -0.98
CLCN6-208ENST00000494028 MGAQ8IWI9 3026 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 DSPP15924 2871 aaKnown RBP8.91□□□□□ -0.98
CLCN6-208ENST00000494028 CACNA1DQ01668 2161 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 IGHV3OR15-7A0A075B7D8 119 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 NKX2-6A6NCS4 301 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 TMEM8BA6NDV4 472 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 OOEPA6NGQ2 149 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 ABCD4O14678 606 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 HBZP02008 142 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 TPT1P13693 172 aaKnown RBP8.91□□□□□ -0.98
CLCN6-208ENST00000494028 PTAFRP25105 342 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 F2RP25116 425 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 SSTR5P35346 364 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 NUP62P37198 522 aaPredicted RBP8.91□□□□□ -0.98
CLCN6-208ENST00000494028 CA7P43166 264 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 GLIPR1P48060 266 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 ASCL1P50553 236 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 TNFAIP6P98066 277 aaPredicted RBP8.91□□□□□ -0.98
CLCN6-208ENST00000494028 BSPH1Q075Z2 132 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 KIAA2026Q5HYC2 2103 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 KRBOX4Q5JUW0 171 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 SSX8Q7RTT4 187 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 FOXRED2Q8IWF2 684 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 CMTM1Q8IZ96 169 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 MRGPRDQ8TDS7 321 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 RND1Q92730 232 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 RBPMSQ93062 196 aaKnown RBP8.91□□□□□ -0.98
CLCN6-208ENST00000494028 SPIN2AQ99865 258 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 SPIN2BQ9BPZ2 258 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 KCNIP1Q9NZI2 227 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 FBXL17Q9UF56 701 aa8.91□□□□□ -0.98
CLCN6-208ENST00000494028 ERRFI1Q9UJM3 462 aaPredicted RBP8.91□□□□□ -0.98
CLCN6-208ENST00000494028 BSNQ9UPA5 3926 aa8.9□□□□□ -0.98
CLCN6-208ENST00000494028 TRGV8A0A0C4DH27 118 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms