RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 GUK1Q16774 197 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 KRTAP24-1Q3LI83 254 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 C3orf36Q3SXR2 165 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 FAM27D1Q5T7N8 215 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF584Q8IVC4 421 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 UEVLDQ8IX04 471 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 TMEM183AQ8IXX5 376 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 C10orf53Q8N6V4 93 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 FAM169BQ8N8A8 192 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 NUP37Q8NFH4 326 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 OR52N4Q8NGI2 321 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 SPATA3Q8NHX4 192 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 RPS4Y2Q8TD47 263 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 TMEM54Q969K7 222 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 RCC1LQ96I51 464 aaKnown RBP6.94□□□□□ -1.3
HDAC6-234ENST00000493923 COMMD4Q9H0A8 199 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 SLC25A31Q9H0C2 315 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 OR51B6Q9H340 312 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 RIMS4Q9H426 269 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-234ENST00000493923 CHODLQ9H9P2 273 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 CMC2Q9NRP2 79 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 OR14J1Q9UGF5 321 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 OR5V1Q9UGF6 321 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF281Q9Y2X9 895 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 IGKV1D-43A0A0B4J1Z2 117 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 TRBV2A0A0J9YWF9 115 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 LOC100289279A0A1B0GTE1 492 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 LMX1BO60663 402 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HIST1H2BKO60814 126 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 DUS4LO95620 317 aaKnown RBP6.93□□□□□ -1.3
HDAC6-234ENST00000493923 TK1P04183 234 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HIST1H2BJP06899 126 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 OR5H8P0DN80 308 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 CCL2P13500 99 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 FABP4P15090 132 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 FUT1P19526 365 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HNF1AP20823 631 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HIST1H2BOP23527 126 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 ZBTB25P24278 435 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 COL8A2P25067 703 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HIST1H2BBP33778 126 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 SNCAP37840 140 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 ALDH3B1P43353 468 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 GPR4P46093 362 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 OR3A1P47881 315 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 PPOXP50336 477 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HIST1H2BDP58876 126 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 ERVS71-1P61550 626 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 RPS23P62266 143 aaKnown RBP6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HIST1H2BCP62807 126 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF85Q03923 595 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 ATXN7L3Q14CW9 347 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF74Q16587 644 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HIST2H2BEQ16778 126 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-234ENST00000493923 OR2T2Q6IF00 324 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 PLBD1Q6P4A8 553 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 Q6ZRG5 221 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF627Q7L945 461 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 TMED4Q7Z7H5 227 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 MEX3DQ86XN8 651 aaKnown RBP6.93□□□□□ -1.3
HDAC6-234ENST00000493923 C1orf87Q8N0U7 546 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 OR2D3Q8NGH3 330 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 PFN4Q8NHR9 129 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 GPR148Q8TDV2 347 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 GPX8Q8TED1 209 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 SECTM1Q8WVN6 248 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HIST1H2BHQ93079 126 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 C1orf159Q96HA4 380 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 FAM46AQ96IP4 442 aaKnown RBP6.93□□□□□ -1.3
HDAC6-234ENST00000493923 SCGB3A2Q96PL1 93 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 TSPAN32Q96QS1 320 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 INTS14Q96SY0 518 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 CNN2Q99439 309 aaKnown RBP6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HIST1H2BNQ99877 126 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 HIST1H2BMQ99879 126 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 SYT3Q9BQG1 590 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF2Q9BSG1 426 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-234ENST00000493923 PIMREGQ9BSJ6 248 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 ULBP2Q9BZM5 246 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF442Q9H7R0 627 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 METTL8Q9H825 291 aaKnown RBP6.93□□□□□ -1.3
HDAC6-234ENST00000493923 TAF9BQ9HBM6 251 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 RAB18Q9NP72 206 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 NOX4Q9NPH5 578 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 STEAP1Q9UHE8 339 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 SLC7A7Q9UM01 511 aa6.93□□□□□ -1.3
HDAC6-234ENST00000493923 BORCS7-ASMTA0A0B4J1R7 106 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 C5orf51A6NDU8 294 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 FAM183AA6NL82 134 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 DCTN6O00399 190 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 EREGO14944 169 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 WIPF1O43516 503 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 SCGNO76038 276 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 PPP1R3DO95685 299 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 CYB5AP00167 134 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 AMY2AP04746 511 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 QDPRP09417 244 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 TACSTD2P09758 323 aa6.92□□□□□ -1.3
HDAC6-234ENST00000493923 SEC11BP0C7V7 166 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms