RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 KCTD12Q96CX2 325 aaKnown RBP13.7□□□□□ -0.22
RER1-208ENST00000493207 BCL7BQ9BQE9 202 aa13.7□□□□□ -0.22
RER1-208ENST00000493207 RIMS4Q9H426 269 aaPredicted RBP13.7□□□□□ -0.22
RER1-208ENST00000493207 TAF9BQ9HBM6 251 aa13.7□□□□□ -0.22
RER1-208ENST00000493207 A0A087X0M5 115 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 IGHV3-43A0A0B4J1X8 118 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 A0A1B0GX30 115 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 HBZP02008 142 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 CD3GP09693 182 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 IGHV3-43DP0DP04 118 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 CD34P28906 385 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 BAMBIQ13145 260 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 CDNFQ49AH0 187 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 UBE2NLQ5JXB2 153 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 ZNF880Q6PDB4 577 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 SAMD12Q8N8I0 201 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 AJUBAQ96IF1 538 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 RAB9BQ9NP90 201 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 ESM1Q9NQ30 184 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 ELF5Q9UKW6 265 aaPredicted RBP13.69□□□□□ -0.22
RER1-208ENST00000493207 CEPT1Q9Y6K0 416 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 C2CD3Q4AC94 2353 aa13.69□□□□□ -0.22
RER1-208ENST00000493207 TRBV6-6A0A0A6YYG2 114 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 A0A0A6YYJ9 748 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 CCDC160A6NGH7 325 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 SERPINE3A8MV23 424 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 H3BMQ9 156 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 F2RL2O00254 374 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 TOR1AO14656 332 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 VENTXO95231 258 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 FBP1P09467 338 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 PAX6P26367 422 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 GNG10P50151 68 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 LOXL3P58215 753 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 HMGN3Q15651 99 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 FAM53AQ6NSI3 398 aaPredicted RBP13.68□□□□□ -0.22
RER1-208ENST00000493207 Q6YL49 198 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 MOB1BQ7L9L4 216 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 ZNF554Q86TJ5 538 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 DUX5Q96PT3 197 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 JMJD8Q96S16 334 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 ABCG5Q9H222 651 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 PRDM13Q9H4Q3 707 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 ZNRD1Q9P1U0 126 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 COMMD3Q9UBI1 195 aa13.68□□□□□ -0.22
RER1-208ENST00000493207 TBL2Q9Y4P3 447 aaKnown RBP13.68□□□□□ -0.22
RER1-208ENST00000493207 TMEM235A6NFC5 223 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 DNAJC9-AS1A6NH13 148 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 HOXA3O43365 443 aaPredicted RBP13.67□□□□□ -0.22
RER1-208ENST00000493207 MELTFP08582 738 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 ZNF182P17025 639 aaPredicted RBP13.67□□□□□ -0.22
RER1-208ENST00000493207 PRRX1P54821 245 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 ARFRP1Q13795 201 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 ARL6IP1Q15041 203 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 ZNF260Q3ZCT1 412 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 LDLRAD2Q5SZI1 272 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 IZUMO1Q8IYV9 350 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 ZDHHC22Q8N966 263 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 OR10V1Q8NGI7 309 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 OR52M1Q8NGK5 317 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 OR4P4Q8NGL7 312 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 OR9G1Q8NH87 305 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 ZNF596Q8TC21 504 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 ACOT12Q8WYK0 555 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 Q9N2K0 584 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.67□□□□□ -0.22
RER1-208ENST00000493207 DIABLOQ9NR28 239 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 TNFRSF19Q9NS68 423 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 GFOD1Q9NXC2 390 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 GNG12Q9UBI6 72 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 PSG11Q9UQ72 335 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 JMJD1CQ15652 2540 aa13.67□□□□□ -0.22
RER1-208ENST00000493207 TRAV18A0A075B6X5 111 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 A0A0A6YYH2 397 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 A0A1W2PPE3 182 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 A6NJ64 397 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 J3QR06 171 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 IGLV1-47P01700 117 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 FCGR3AP08637 254 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 GSTP1P09211 210 aaKnown RBP13.66□□□□□ -0.22
RER1-208ENST00000493207 SOX6P35712 828 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 TALDO1P37837 337 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 HLA-DRB3P79483 266 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 HLA-DRB5Q30154 266 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 HACD4Q5VWC8 232 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 MZT2AQ6P582 158 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 DYNAPQ8N1N2 210 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 DTX3Q8N9I9 347 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 BEND2Q8NDZ0 799 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 IL1F10Q8WWZ1 152 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 AP3S1Q92572 193 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 GALMQ96C23 342 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 S100A16Q96FQ6 103 aaKnown RBP13.66□□□□□ -0.22
RER1-208ENST00000493207 MMP28Q9H239 520 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 OR2S2Q9NQN1 319 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 ZNF230Q9UIE0 474 aaPredicted RBP13.66□□□□□ -0.22
RER1-208ENST00000493207 MGAT4AQ9UM21 535 aa13.66□□□□□ -0.22
RER1-208ENST00000493207 POM121CA8CG34 1229 aa13.65□□□□□ -0.22
RER1-208ENST00000493207 HPGDSO60760 199 aa13.65□□□□□ -0.22
RER1-208ENST00000493207 IGHV4-59P01825 116 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms