RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 A0A1W2PPE3 182 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 EFCAB10A6NFE3 127 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 C12orf77C9JDV5 145 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 SDCBPO00560 298 aaPredicted RBP6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 GNAO1P09471 354 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 PF4V1P10720 104 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 SERPINA2P20848 420 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 MYCNOSP40205 109 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 GNG10P50151 68 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 GP2P55259 537 aaKnown RBP6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 TAS2R43P59537 309 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 CFHR3Q02985 330 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 SLC22A6Q4U2R8 563 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 CT45A1Q5HYN5 189 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 C6orf141Q5SZD1 244 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 FAM53AQ6NSI3 398 aaPredicted RBP6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 UNQ9370/PRO34162Q6UXP9 181 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF329Q86UD4 541 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 STPG2Q8N412 459 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 FAM71E2Q8N5Q1 922 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 SETD9Q8NE22 299 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 OR8H1Q8NGG4 311 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 OR10X1Q8NGY0 326 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 OR2T10Q8NGZ9 312 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 CT45A3Q8NHU0 189 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 ARL11Q969Q4 196 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 Q96M66 194 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 NOL4LQ96MY1 436 aaPredicted RBP6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 UQCC2Q9BRT2 126 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 CKLFQ9UBR5 152 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 SORL1Q92673 2214 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 TENM3Q9P273 2699 aa6.59□□□□□ -1.35
SMARCB1-207ENST00000491967 MCRIP1C9JLW8 97 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 ANKRD65E5RJM6 399 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 H0YHG0 523 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 AIPO00170 330 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 AP4M1O00189 453 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 CASQ2O14958 399 aaPredicted RBP6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 SLC31A2O15432 143 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 TXNL1O43396 289 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 LANCL1O43813 399 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 BAG2O95816 211 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 MOSP00540 346 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 PF4P02776 101 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 IGF1P05019 195 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 RCC1P18754 421 aaPredicted RBP6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 FUT3P21217 361 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 GPR12P47775 334 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 MED21Q13503 144 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 HNF4GQ14541 408 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 LTC4SQ16873 150 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 ATAD3CQ5T2N8 411 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 SYT6Q5T7P8 510 aaPredicted RBP6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 OGFRL1Q5TC84 451 aaPredicted RBP6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 RAB12Q6IQ22 244 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 TRAT1Q6PIZ9 186 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 GLIPR1L1Q6UWM5 242 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 C18orf65Q6ZTR6 163 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 SLC35E3Q7Z769 313 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 ODF3L1Q8IXM7 274 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 STX19Q8N4C7 294 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 DHRSXQ8N5I4 330 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 NANOGP1Q8N7R0 232 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 NKAIN3Q8N8D7 197 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 ZFP41Q8N8Y5 198 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 OR51D1Q8NGF3 324 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 MYOZ3Q8TDC0 251 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 CYGBQ8WWM9 190 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 MUL1Q969V5 352 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 OR14A2Q96R54 314 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 S1PR3Q99500 378 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 S100A13Q99584 98 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 MCRIP2Q9BUT9 160 aaKnown RBP6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 GHRLQ9UBU3 117 aa6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 MRPS28Q9Y2Q9 187 aaKnown RBP6.58□□□□□ -1.36
SMARCB1-207ENST00000491967 WI2-2373I1.2A0A1W2PRP0 233 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 SERPINE3A8MV23 424 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 ZNF736B4DX44 427 aaPredicted RBP6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 IGHG4P01861 327 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 HBZP02008 142 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 MGMTP16455 207 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 CELP19835 753 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 IL3RAP26951 378 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 CAPGP40121 348 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 CDX1P47902 265 aaPredicted RBP6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 REG1BP48304 166 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 F2RL1P55085 397 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 WNT4P56705 351 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 SLC35B1P78383 322 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 QRFPP83859 136 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 HTD2P86397 168 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 FOXE3Q13461 319 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 KIAA0141Q14154 515 aaPredicted RBP6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 HES1Q14469 280 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 KIR2DS1Q14954 304 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 PNLIPRP3Q17RR3 467 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 LRRC36Q1X8D7 754 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 MORN2Q502X0 79 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 C9orf152Q5JTZ5 239 aa6.57□□□□□ -1.36
SMARCB1-207ENST00000491967 C1orf100Q5SVJ3 147 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms