RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 EBAG9O00559 213 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 GPX5O75715 221 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 GPR12P47775 334 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 EGFEM1PQ0D2K5 195 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 GPR176Q14439 515 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 AWAT2Q6E213 333 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 GLIPR1L1Q6UWM5 242 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 TGIF2LXQ8IUE1 241 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 COMMD1Q8N668 190 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 ZNF485Q8NCK3 441 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 ZNF439Q8NDP4 499 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 TMEM104Q8NE00 496 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 OR2T10Q8NGZ9 312 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 OR4K15Q8NH41 348 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 RTN4IP1Q8WWV3 396 aaPredicted RBP10.75□□□□□ -0.69
COL6A3-211ENST00000491233 ST6GALNAC6Q969X2 333 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 SPACA1Q9HBV2 294 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 ZFP57Q9NU63 452 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 LIN7CQ9NUP9 197 aaKnown RBP10.75□□□□□ -0.69
COL6A3-211ENST00000491233 TRAPPC2LQ9UL33 140 aa10.75□□□□□ -0.69
COL6A3-211ENST00000491233 MCRIP1C9JLW8 97 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 AP4M1O00189 453 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 SLC6A1P30531 599 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 MYCNOSP40205 109 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 Q3ZCU0 254 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 DEFB121Q5J5C9 76 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 C6orf183Q5T699 404 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 SYT6Q5T7P8 510 aaPredicted RBP10.74□□□□□ -0.69
COL6A3-211ENST00000491233 TTC23Q5W5X9 447 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 RAB12Q6IQ22 244 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 C11orf87Q6NUJ2 197 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 ZNF695Q8IW36 515 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 Q8N9W7 124 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 OR10V1Q8NGI7 309 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 DUX3Q96PT4 197 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 P2RX4Q99571 388 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 ABCG5Q9H222 651 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 ETAA1Q9NY74 926 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 GNG12Q9UBI6 72 aa10.74□□□□□ -0.69
COL6A3-211ENST00000491233 ZNF736B4DX44 427 aaPredicted RBP10.73□□□□□ -0.69
COL6A3-211ENST00000491233 SPINT2O43291 252 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 TXNL1O43396 289 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 MOSP00540 346 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 HBZP02008 142 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 MAS1P04201 325 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 MGMTP16455 207 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 CD1BP29016 333 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 ZNF137PP52743 207 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 TAS2R43P59537 309 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 ADARB1P78563 741 aaKnown RBP10.73□□□□□ -0.69
COL6A3-211ENST00000491233 ST3GAL4Q11206 333 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 TMEM30BQ3MIR4 351 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 SLC25A48Q6ZT89 311 aaKnown RBP10.73□□□□□ -0.69
COL6A3-211ENST00000491233 PRR18Q8N4B5 295 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 DHRSXQ8N5I4 330 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 OR1L1Q8NH94 360 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 GGHQ92820 318 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 RBMXL1Q96E39 390 aaKnown RBP10.73□□□□□ -0.69
COL6A3-211ENST00000491233 MRPS24Q96EL2 167 aaKnown RBP10.73□□□□□ -0.69
COL6A3-211ENST00000491233 CYYR1Q96J86 154 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 DERL3Q96Q80 235 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 MCRIP2Q9BUT9 160 aaKnown RBP10.73□□□□□ -0.69
COL6A3-211ENST00000491233 SELENOIQ9C0D9 397 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 BANF2Q9H503 90 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 RAB9BQ9NP90 201 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 PEX16Q9Y5Y5 336 aa10.73□□□□□ -0.69
COL6A3-211ENST00000491233 MYL12BO14950 172 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 RPLP1P05386 114 aaKnown RBP10.72□□□□□ -0.69
COL6A3-211ENST00000491233 RAB25P57735 213 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 DOC2BQ14184 412 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 CXorf66Q5JRM2 361 aaPredicted RBP10.72□□□□□ -0.69
COL6A3-211ENST00000491233 TEX38Q6PEX7 206 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 TRAT1Q6PIZ9 186 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 LCNL1Q6ZST4 164 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 GAPTQ8N292 157 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 PACRGLQ8N7B6 248 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 Q96M66 194 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 S1PR3Q99500 378 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 RASL11BQ9BPW5 248 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 HSPB9Q9BQS6 159 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 C8orf4Q9NR00 106 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 PLSCR3Q9NRY6 295 aa10.72□□□□□ -0.69
COL6A3-211ENST00000491233 FAM90A10PA6NDY2 464 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 EFCAB10A6NFE3 127 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 FAM90A7PA6NKC0 464 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 FAM90A23PA8MXZ1 464 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 H0YHG0 523 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 RRP9O43818 475 aaKnown RBP10.71□□□□□ -0.69
COL6A3-211ENST00000491233 CRTAPO75718 401 aaPredicted RBP10.71□□□□□ -0.69
COL6A3-211ENST00000491233 SC5DO75845 299 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 RCC1P18754 421 aaPredicted RBP10.71□□□□□ -0.69
COL6A3-211ENST00000491233 CELP19835 753 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 CAPGP40121 348 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 VHLP40337 213 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 ZNF134P52741 427 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 GPR50Q13585 617 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 GNMTQ14749 295 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 PNLIPRP3Q17RR3 467 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 DEFB136Q30KP8 78 aa10.71□□□□□ -0.69
COL6A3-211ENST00000491233 CT45A1Q5HYN5 189 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms