RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 OR10A7Q8NGE5 316 aa14.5□□□□□ -0.09
COL9A3-214ENST00000490398 OR6M1Q8NGM8 313 aa14.5□□□□□ -0.09
COL9A3-214ENST00000490398 OR2T6Q8NHC8 308 aa14.5□□□□□ -0.09
COL9A3-214ENST00000490398 MRPL30Q8TCC3 161 aaKnown RBP14.5□□□□□ -0.09
COL9A3-214ENST00000490398 FAAP24Q9BTP7 215 aa14.5□□□□□ -0.09
COL9A3-214ENST00000490398 CST11Q9H112 138 aa14.5□□□□□ -0.09
COL9A3-214ENST00000490398 GFOD1Q9NXC2 390 aa14.5□□□□□ -0.09
COL9A3-214ENST00000490398 PITPNC1Q9UKF7 332 aa14.5□□□□□ -0.09
COL9A3-214ENST00000490398 TRAPPC2LQ9UL33 140 aa14.5□□□□□ -0.09
COL9A3-214ENST00000490398 BLOC1S6Q9UL45 172 aa14.5□□□□□ -0.09
COL9A3-214ENST00000490398 A0A1W2PPI3 338 aa14.49□□□□□ -0.09
COL9A3-214ENST00000490398 SDCBPO00560 298 aaPredicted RBP14.49□□□□□ -0.09
COL9A3-214ENST00000490398 TIMM23O14925 209 aa14.49□□□□□ -0.09
COL9A3-214ENST00000490398 VSIG10L2P0DP72 767 aa14.49□□□□□ -0.09
COL9A3-214ENST00000490398 GABARAPL2P60520 117 aa14.49□□□□□ -0.09
COL9A3-214ENST00000490398 C6orf201Q7Z4U5 140 aa14.49□□□□□ -0.09
COL9A3-214ENST00000490398 SPARTQ8N0X7 666 aa14.49□□□□□ -0.09
COL9A3-214ENST00000490398 PRR18Q8N4B5 295 aa14.49□□□□□ -0.09
COL9A3-214ENST00000490398 CFHR4Q92496 578 aa14.49□□□□□ -0.09
COL9A3-214ENST00000490398 TM2D1Q9BX74 207 aa14.49□□□□□ -0.09
COL9A3-214ENST00000490398 TMEM59Q9BXS4 323 aa14.49□□□□□ -0.09
COL9A3-214ENST00000490398 LPAR5Q9H1C0 372 aa14.49□□□□□ -0.09
COL9A3-214ENST00000490398 RRP15Q9Y3B9 282 aaKnown RBP14.49□□□□□ -0.09
COL9A3-214ENST00000490398 FAM90A9PA6NNJ1 464 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 SLC17A2O00624 439 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 SOCS1O15524 211 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 TSPAN15O95858 294 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 HBZP02008 142 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 AMY1AP04745 511 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 AMY2AP04746 511 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 PSMA1P25786 263 aaKnown RBP14.48□□□□□ -0.09
COL9A3-214ENST00000490398 CEACAM3P40198 252 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 REG1BP48304 166 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 ZNF134P52741 427 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 OR10A3P58181 314 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 DRAM1Q8N682 238 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 OR10V1Q8NGI7 309 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 OR56B4Q8NH76 319 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 CAPSLQ8WWF8 208 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 TOMM40LQ969M1 308 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 RPEQ96AT9 228 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 PLGRKTQ9HBL7 147 aa14.48□□□□□ -0.09
COL9A3-214ENST00000490398 ARL6IP5O75915 188 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 BPNT1O95861 308 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 GLAP06280 429 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 SNRNP70P08621 437 aaKnown RBP14.47□□□□□ -0.09
COL9A3-214ENST00000490398 BRS3P32247 399 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 MADCAM1Q13477 382 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 GNMTQ14749 295 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 UBE2UQ5VVX9 321 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 CD200R1LQ6Q8B3 271 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 SLC16A12Q6ZSM3 486 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 ZNF439Q8NDP4 499 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 OR51D1Q8NGF3 324 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 OR52M1Q8NGK5 317 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 OR10X1Q8NGY0 326 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 KCNG3Q8TAE7 436 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 CREB3L1Q96BA8 519 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 SLC25A33Q9BSK2 321 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 PRSS22Q9GZN4 317 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 TAF9BQ9HBM6 251 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 MBNL3Q9NUK0 354 aaKnown RBP14.47□□□□□ -0.09
COL9A3-214ENST00000490398 NDUFB11Q9NX14 153 aa14.47□□□□□ -0.09
COL9A3-214ENST00000490398 FOXI3A8MTJ6 420 aaPredicted RBP14.46□□□□□ -0.09
COL9A3-214ENST00000490398 OOSP1A8MZH6 123 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 HERPUD1Q15011 391 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 RAB11BQ15907 218 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 CT45A1Q5HYN5 189 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 HES5Q5TA89 166 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 LYG1Q8N1E2 194 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 LINC00311Q8N616 119 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 OR52L2PQ8NGH6 319 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 CT45A3Q8NHU0 189 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 WIPF2Q8TF74 440 aaPredicted RBP14.46□□□□□ -0.09
COL9A3-214ENST00000490398 RBM14Q96PK6 669 aaKnown RBP14.46□□□□□ -0.09
COL9A3-214ENST00000490398 OCSTAMPQ9BR26 566 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 HDHD3Q9BSH5 251 aaPredicted RBP14.46□□□□□ -0.09
COL9A3-214ENST00000490398 WNT10AQ9GZT5 417 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 LIN7BQ9HAP6 207 aa14.46□□□□□ -0.09
COL9A3-214ENST00000490398 AMMECR1Q9Y4X0 333 aaPredicted RBP14.46□□□□□ -0.09
COL9A3-214ENST00000490398 WNK1Q9H4A3 2382 aa14.46□□□□□ -0.1
COL9A3-214ENST00000490398 IGHV3-72A0A0B4J1Y9 119 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 HSD17B6O14756 317 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 LDLRAD4O15165 306 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 CA11O75493 328 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 OR2F2O95006 317 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 CD28P10747 220 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 ARSBP15848 533 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 BLVRBP30043 206 aaPredicted RBP14.45□□□□□ -0.1
COL9A3-214ENST00000490398 MNDAP41218 407 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 TMEM50BP56557 158 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 C2orf76Q3KRA6 126 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 C6orf183Q5T699 404 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 NR2C2APQ86WQ0 139 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 ST6GALNAC6Q969X2 333 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 NEDD4LQ96PU5 975 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 V9GY05 133 aa14.45□□□□□ -0.1
COL9A3-214ENST00000490398 A0A0B4J203 849 aa14.44□□□□□ -0.1
COL9A3-214ENST00000490398 TRDV1A0A1B0GX56 115 aa14.44□□□□□ -0.1
COL9A3-214ENST00000490398 SMIM30A4D0T7 59 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms