RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 TMEM11P17152 192 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 SRMP19623 302 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 PSMA1P25786 263 aaKnown RBP13.94□□□□□ -0.18
SEC13-218ENST00000490283 IRF3Q14653 427 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 Q3ZCU0 254 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 FAM27D1Q5T7N8 215 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 IZUMO2Q6UXV1 221 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 Q6ZS46 218 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 CENPVQ7Z7K6 275 aaPredicted RBP13.94□□□□□ -0.18
SEC13-218ENST00000490283 LYPD6Q86Y78 171 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 PRR18Q8N4B5 295 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 C8orf31Q8N9H6 132 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 OR4F17Q8NGA8 305 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 OR4K15Q8NH41 348 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 UBALD1Q8TB05 177 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 OR4F4Q96R69 305 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 OCSTAMPQ9BR26 566 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 DUSP21Q9H596 190 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 BLOC1S6Q9UL45 172 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 IGHV3-43A0A0B4J1X8 118 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 A0A1W2PPI3 338 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 UBE2QL1A1L167 161 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 OPN1MWP04001 364 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 OPN1MW2P0DN77 364 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 OPN1MW3P0DN78 364 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 IGHV3-43DP0DP04 118 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 NKAPLQ5M9Q1 402 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 HIST2H2BDQ6DRA6 164 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 MOB3BQ86TA1 216 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 LYG1Q8N1E2 194 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 LINC00311Q8N616 119 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 OR5AU1Q8NGC0 362 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 KCNG3Q8TAE7 436 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 SGCDQ92629 289 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 TMEM59Q9BXS4 323 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 ISYNA1Q9NPH2 558 aa13.93□□□□□ -0.18
SEC13-218ENST00000490283 FAM90A9PA6NNJ1 464 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 C12orf77C9JDV5 145 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 KCNAB3O43448 404 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 ARL6IP5O75915 188 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 HBZP02008 142 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 UCHL1P09936 223 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 CRHBPP24387 322 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 HTR2CP28335 458 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 RANBP1P43487 201 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 ZNF816Q0VGE8 651 aaPredicted RBP13.92□□□□□ -0.18
SEC13-218ENST00000490283 C1orf100Q5SVJ3 147 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 PRSS48Q7RTY5 328 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 LRRTM1Q86UE6 522 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 OR4X2Q8NGF9 303 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 OR6M1Q8NGM8 313 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 TMEM203Q969S6 136 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 R3HDM4Q96D70 268 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 CNBD2Q96M20 576 aa13.92□□□□□ -0.18
SEC13-218ENST00000490283 CITED2Q99967 270 aaPredicted RBP13.92□□□□□ -0.18
SEC13-218ENST00000490283 TXNL1O43396 289 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 SC5DO75845 299 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 IGKV1D-33P01593 117 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 IGKV1-33P01594 117 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 VHLP40337 213 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 REG1BP48304 166 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 LOXL3P58215 753 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 MLLT11Q13015 90 aaPredicted RBP13.91□□□□□ -0.18
SEC13-218ENST00000490283 TPBGQ13641 420 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 DIAPH2-AS1Q14236 149 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 ZNF554Q86TJ5 538 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 GAPTQ8N292 157 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 WIPF2Q8TF74 440 aaPredicted RBP13.91□□□□□ -0.18
SEC13-218ENST00000490283 PLGRKTQ9HBL7 147 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 MEGF8Q7Z7M0 2845 aa13.91□□□□□ -0.18
SEC13-218ENST00000490283 IGHV1-3A0A0C4DH29 117 aa13.9□□□□□ -0.18
SEC13-218ENST00000490283 FGF16O43320 207 aa13.9□□□□□ -0.18
SEC13-218ENST00000490283 BPNT1O95861 308 aa13.9□□□□□ -0.18
SEC13-218ENST00000490283 VSIG8P0DPA2 414 aa13.9□□□□□ -0.18
SEC13-218ENST00000490283 RCC1P18754 421 aaPredicted RBP13.9□□□□□ -0.18
SEC13-218ENST00000490283 GP2P55259 537 aaKnown RBP13.9□□□□□ -0.18
SEC13-218ENST00000490283 RPS27AP62979 156 aaKnown RBP13.9□□□□□ -0.18
SEC13-218ENST00000490283 HNF4GQ14541 408 aa13.9□□□□□ -0.18
SEC13-218ENST00000490283 PDLIM3Q53GG5 364 aaPredicted RBP13.9□□□□□ -0.18
SEC13-218ENST00000490283 FBLN7Q53RD9 439 aa13.9□□□□□ -0.18
SEC13-218ENST00000490283 SIGIRRQ6IA17 410 aa13.9□□□□□ -0.18
SEC13-218ENST00000490283 OR10V1Q8NGI7 309 aa13.9□□□□□ -0.18
SEC13-218ENST00000490283 OR1L1Q8NH94 360 aa13.9□□□□□ -0.18
SEC13-218ENST00000490283 TAF9BQ9HBM6 251 aa13.9□□□□□ -0.18
SEC13-218ENST00000490283 TCRBV4S1A1TA0A5B7 111 aa13.89□□□□□ -0.19
SEC13-218ENST00000490283 SH2D7A6NKC9 451 aaPredicted RBP13.89□□□□□ -0.19
SEC13-218ENST00000490283 SLC22A1O15245 554 aa13.89□□□□□ -0.19
SEC13-218ENST00000490283 CPEP16870 476 aa13.89□□□□□ -0.19
SEC13-218ENST00000490283 RPS25P62851 125 aaKnown RBP13.89□□□□□ -0.19
SEC13-218ENST00000490283 OR10K2Q6IF99 312 aa13.89□□□□□ -0.19
SEC13-218ENST00000490283 SLC25A48Q6ZT89 311 aaKnown RBP13.89□□□□□ -0.19
SEC13-218ENST00000490283 TGIF2LXQ8IUE1 241 aa13.89□□□□□ -0.19
SEC13-218ENST00000490283 OR2T10Q8NGZ9 312 aa13.89□□□□□ -0.19
SEC13-218ENST00000490283 MGLLQ99685 303 aa13.89□□□□□ -0.19
SEC13-218ENST00000490283 URM1Q9BTM9 101 aaKnown RBP13.89□□□□□ -0.19
SEC13-218ENST00000490283 CHMP1AQ9HD42 196 aaPredicted RBP13.89□□□□□ -0.19
SEC13-218ENST00000490283 ACOT13Q9NPJ3 140 aa13.89□□□□□ -0.19
SEC13-218ENST00000490283 OR2S2Q9NQN1 319 aa13.89□□□□□ -0.19
SEC13-218ENST00000490283 MBNL3Q9NUK0 354 aaKnown RBP13.89□□□□□ -0.19
SEC13-218ENST00000490283 ABRACLQ9P1F3 81 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms