RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 TMEM106AQ96A25 262 aa12.38□□□□□ -0.43
PLOD3-216ENST00000489927 KCTD7Q96MP8 289 aa12.38□□□□□ -0.43
PLOD3-216ENST00000489927 GMPPBQ9Y5P6 360 aa12.38□□□□□ -0.43
PLOD3-216ENST00000489927 MT-ND4P03905 459 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 IGF1P05019 195 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 CHATP28329 748 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 ZNF93P35789 620 aaPredicted RBP12.37□□□□□ -0.43
PLOD3-216ENST00000489927 VHLP40337 213 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 ZNF134P52741 427 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 RAB40BQ12829 278 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 Q3ZCU0 254 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 KLHL22Q53GT1 634 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 DDI2Q5TDH0 399 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 XAF1Q6GPH4 301 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 ZNF497Q6ZNH5 498 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 SLC25A48Q6ZT89 311 aaKnown RBP12.37□□□□□ -0.43
PLOD3-216ENST00000489927 LINC00596Q86U02 117 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 ZNF439Q8NDP4 499 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 OR52I1Q8NGK6 324 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 MYOZ3Q8TDC0 251 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 GPR148Q8TDV2 347 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 TMEM138Q9NPI0 162 aa12.37□□□□□ -0.43
PLOD3-216ENST00000489927 SACSQ9NZJ4 4579 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 A0A1W2PP11 408 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 C12orf77C9JDV5 145 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 AIPO00170 330 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 TXNL1O43396 289 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 CD2P06729 351 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 SLC2A2P11168 524 aaPredicted RBP12.36□□□□□ -0.43
PLOD3-216ENST00000489927 ZNF137PP52743 207 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 MPV17LQ2QL34 196 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 RHOXF1Q8NHV9 184 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 ORAI1Q96D31 301 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 Q96MT0 163 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 S100A13Q99584 98 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 KLK15Q9H2R5 256 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 GNB4Q9HAV0 340 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 PAK1IP1Q9NWT1 392 aaPredicted RBP12.36□□□□□ -0.43
PLOD3-216ENST00000489927 GNG12Q9UBI6 72 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 ZNF107Q9UII5 783 aaPredicted RBP12.36□□□□□ -0.43
PLOD3-216ENST00000489927 ZNF580Q9UK33 172 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 SMAD5-AS1Q9Y6J3 95 aa12.36□□□□□ -0.43
PLOD3-216ENST00000489927 CIB2O75838 187 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 LY86O95711 162 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 LIMS3P0CW19 117 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 LIMS4P0CW20 117 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 OR5H8P0DN80 308 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 MYF6P23409 242 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 PPP3R1P63098 170 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 KIAA0141Q14154 515 aaPredicted RBP12.35□□□□□ -0.43
PLOD3-216ENST00000489927 SLC22A6Q4U2R8 563 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 CT45A1Q5HYN5 189 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 ASPHD1Q5U4P2 390 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 CBR4Q8N4T8 237 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 OR10V1Q8NGI7 309 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 OR1N2Q8NGR9 330 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 CT45A3Q8NHU0 189 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 UBE2E2Q96LR5 201 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 WSB1Q9Y6I7 421 aa12.35□□□□□ -0.43
PLOD3-216ENST00000489927 EPPK1P58107 5090 aaKnown RBP12.34□□□□□ -0.43
PLOD3-216ENST00000489927 G3V318 75 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 H3BNX3 289 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 I3L521 148 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 SPINT2O43291 252 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 ZNF780AO75290 641 aaPredicted RBP12.34□□□□□ -0.43
PLOD3-216ENST00000489927 ATP5HO75947 161 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 OR8U8P0C7N1 319 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 GTF2F2P13984 249 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 PPIFP30405 207 aaKnown RBP12.34□□□□□ -0.43
PLOD3-216ENST00000489927 BDKRB2P30411 391 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 INSL3P51460 131 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 CCDC58Q4VC31 144 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 CASC10Q5T4H9 136 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 SYT6Q5T7P8 510 aaPredicted RBP12.34□□□□□ -0.43
PLOD3-216ENST00000489927 RPL22L1Q6P5R6 122 aaKnown RBP12.34□□□□□ -0.43
PLOD3-216ENST00000489927 PRR18Q8N4B5 295 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 STX19Q8N4C7 294 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 ZNF491Q8N8L2 437 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 OR5B12Q96R08 314 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 MRPS18AQ9NVS2 196 aaKnown RBP12.34□□□□□ -0.43
PLOD3-216ENST00000489927 RCC2Q9P258 522 aaKnown RBP12.34□□□□□ -0.43
PLOD3-216ENST00000489927 TRAPPC2LQ9UL33 140 aa12.34□□□□□ -0.43
PLOD3-216ENST00000489927 HBZP02008 142 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 GNB1P62873 340 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 RUNX1Q01196 453 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 ZNF616Q08AN1 781 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 LSAMPQ13449 338 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 MMDQ15546 238 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 TMEM65Q6PI78 240 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 SBSPONQ8IVN8 264 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 OR4K15Q8NH41 348 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 OR1L1Q8NH94 360 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 APH1BQ8WW43 257 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 RITA1Q96K30 269 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 ZNF184Q99676 751 aaPredicted RBP12.33□□□□□ -0.44
PLOD3-216ENST00000489927 CHCHD6Q9BRQ6 235 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 ETAA1Q9NY74 926 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 VSIG4Q9Y279 399 aa12.33□□□□□ -0.44
PLOD3-216ENST00000489927 RPL36Q9Y3U8 105 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms