RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 RTN4IP1Q8WWV3 396 aaPredicted RBP9.32□□□□□ -0.92
SRSF4-204ENST00000489898 R3HDM4Q96D70 268 aa9.32□□□□□ -0.92
SRSF4-204ENST00000489898 NOL4LQ96MY1 436 aaPredicted RBP9.32□□□□□ -0.92
SRSF4-204ENST00000489898 MYCBPQ99417 103 aaPredicted RBP9.32□□□□□ -0.92
SRSF4-204ENST00000489898 BANF2Q9H503 90 aa9.32□□□□□ -0.92
SRSF4-204ENST00000489898 FGF16O43320 207 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 IGKV1D-33P01593 117 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 IGKV1-33P01594 117 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 IGHG2P01859 326 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 GTF2F2P13984 249 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 MGMTP16455 207 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 CELP19835 753 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 CHATP28329 748 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 BRS3P32247 399 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 CEACAM3P40198 252 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 REG1BP48304 166 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 TAS2R43P59537 309 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 Q3ZCU0 254 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 CT45A1Q5HYN5 189 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 C1orf100Q5SVJ3 147 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 CCDC144NLQ6NUI1 221 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 TMEM91Q6ZNR0 172 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 CDH26Q8IXH8 852 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 OR1L1Q8NH94 360 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 CT45A3Q8NHU0 189 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 RPEQ96AT9 228 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 CREB3L1Q96BA8 519 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 EAF1Q96JC9 268 aaPredicted RBP9.31□□□□□ -0.92
SRSF4-204ENST00000489898 HSPB9Q9BQS6 159 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 BARHL1Q9BZE3 327 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 ING4Q9UNL4 249 aa9.31□□□□□ -0.92
SRSF4-204ENST00000489898 IGHV3-72A0A0B4J1Y9 119 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 A0A1W2PRX2 142 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 FAM90A10PA6NDY2 464 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 FAM90A7PA6NKC0 464 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 FAM90A23PA8MXZ1 464 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 AIPO00170 330 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 ZNF780AO75290 641 aaPredicted RBP9.3□□□□□ -0.92
SRSF4-204ENST00000489898 MAS1P04201 325 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 VSIG8P0DPA2 414 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 SNRPBP14678 240 aaKnown RBP9.3□□□□□ -0.92
SRSF4-204ENST00000489898 IGLL1P15814 213 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 RAB7AP51149 207 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 PRRX1P54821 245 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 FOXB2Q5VYV0 432 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 OR10K2Q6IF99 312 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 RAB12Q6IQ22 244 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 ZNF880Q6PDB4 577 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 ZNF565Q8N9K5 539 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 BPIFB6Q8NFQ5 453 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 OR4K15Q8NH41 348 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 CCDC107Q8WV48 283 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 MRPS24Q96EL2 167 aaKnown RBP9.3□□□□□ -0.92
SRSF4-204ENST00000489898 SULT4A1Q9BR01 284 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 NICN1Q9BSH3 213 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 PARP12Q9H0J9 701 aaKnown RBP9.3□□□□□ -0.92
SRSF4-204ENST00000489898 DUSP21Q9H596 190 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 PCDHB16Q9NRJ7 776 aa9.3□□□□□ -0.92
SRSF4-204ENST00000489898 AMMECR1Q9Y4X0 333 aaPredicted RBP9.3□□□□□ -0.92
SRSF4-204ENST00000489898 SHISA3A0PJX4 238 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 TMEM14DPA8MWL7 114 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 K7EIL1 84 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 TOR1AO14656 332 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 SLC22A1O15245 554 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 MAGEB3O15480 346 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 NAPSAO96009 420 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 HBZP02008 142 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 UCHL1P09936 223 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 EGFEM1PQ0D2K5 195 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 HMGN3Q15651 99 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 SYT6Q5T7P8 510 aaPredicted RBP9.29□□□□□ -0.92
SRSF4-204ENST00000489898 AWAT2Q6E213 333 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 ZNF329Q86UD4 541 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 JAGN1Q8N5M9 183 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 NKAIN3Q8N8D7 197 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 RNF152Q8N8N0 203 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 OR4F17Q8NGA8 305 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 CAPSLQ8WWF8 208 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 ARL11Q969Q4 196 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 FAM46BQ96A09 425 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 OR4F4Q96R69 305 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 P2RX4Q99571 388 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 ZNF251Q9BRH9 671 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 UQCC2Q9BRT2 126 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 TM2D1Q9BX74 207 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 IFI27L2Q9H2X8 130 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 LINC00527Q9UJ94 153 aa9.29□□□□□ -0.92
SRSF4-204ENST00000489898 TSSC4Q9Y5U2 329 aaPredicted RBP9.29□□□□□ -0.92
SRSF4-204ENST00000489898 RYR2Q92736 4967 aa9.28□□□□□ -0.92
SRSF4-204ENST00000489898 M0QZK8 103 aa9.28□□□□□ -0.92
SRSF4-204ENST00000489898 SDCBPO00560 298 aaPredicted RBP9.28□□□□□ -0.92
SRSF4-204ENST00000489898 MYL12BO14950 172 aa9.28□□□□□ -0.92
SRSF4-204ENST00000489898 PDCD6O75340 191 aa9.28□□□□□ -0.92
SRSF4-204ENST00000489898 CSTBP04080 98 aaKnown RBP9.28□□□□□ -0.92
SRSF4-204ENST00000489898 TMEM11P17152 192 aa9.28□□□□□ -0.92
SRSF4-204ENST00000489898 GPR12P47775 334 aa9.28□□□□□ -0.92
SRSF4-204ENST00000489898 RPL23AP62750 156 aaKnown RBP9.28□□□□□ -0.92
SRSF4-204ENST00000489898 RPS27AP62979 156 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms