RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 DEFB119Q8N690 84 aa1.22□□□□□ -2.21
CCDC39-206ENST00000489868 OR5P2Q8WZ92 322 aa1.22□□□□□ -2.21
CCDC39-206ENST00000489868 BCL2L14Q9BZR8 327 aa1.22□□□□□ -2.21
CCDC39-206ENST00000489868 ADAMTSL1Q8N6G6 1762 aa1.21□□□□□ -2.22
CCDC39-206ENST00000489868 TRAV8-2A0A0B4J237 113 aa1.21□□□□□ -2.22
CCDC39-206ENST00000489868 PDGFRLQ15198 375 aa1.21□□□□□ -2.22
CCDC39-206ENST00000489868 STK38Q15208 465 aa1.21□□□□□ -2.22
CCDC39-206ENST00000489868 TRAM1Q15629 374 aa1.21□□□□□ -2.22
CCDC39-206ENST00000489868 FAM162BQ5T6X4 162 aa1.21□□□□□ -2.22
CCDC39-206ENST00000489868 EBLN2Q6P2I7 272 aa1.21□□□□□ -2.22
CCDC39-206ENST00000489868 OR9I1Q8NGQ6 314 aa1.21□□□□□ -2.22
CCDC39-206ENST00000489868 TMBIM1Q969X1 311 aa1.21□□□□□ -2.22
CCDC39-206ENST00000489868 TAPBPLQ9BX59 468 aa1.21□□□□□ -2.22
CCDC39-206ENST00000489868 TAS2R13Q9NYV9 303 aa1.21□□□□□ -2.22
CCDC39-206ENST00000489868 MYO15BQ96JP2 1530 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 ATAD5Q96QE3 1844 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 MGAT4DA6NG13 374 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 SIGLEC16A6NMB1 481 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 ZMPSTE24O75844 475 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 OTCP00480 354 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 OR4A8P0C604 315 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 HSPA13P48723 471 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 DNASE1L1P49184 302 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 Q9BRP9 147 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 UPK3BQ9BT76 320 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 SMDT1Q9H4I9 107 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 CLEC2DQ9UHP7 191 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 PLCH2O75038 1416 aa1.2□□□□□ -2.22
CCDC39-206ENST00000489868 PTPRJQ12913 1337 aa1.19□□□□□ -2.22
CCDC39-206ENST00000489868 E7EWF7 191 aa1.19□□□□□ -2.22
CCDC39-206ENST00000489868 RTEL1-TNFRSF6BF6WH68 1400 aa1.19□□□□□ -2.22
CCDC39-206ENST00000489868 RNASEK-C17orf49H0YIS7 233 aa1.19□□□□□ -2.22
CCDC39-206ENST00000489868 C1QTNF8P60827 252 aa1.19□□□□□ -2.22
CCDC39-206ENST00000489868 TRIP13Q15645 432 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-206ENST00000489868 TRIML2Q8N7C3 387 aa1.19□□□□□ -2.22
CCDC39-206ENST00000489868 PGLYRP3Q96LB9 341 aa1.19□□□□□ -2.22
CCDC39-206ENST00000489868 GPR22Q99680 433 aa1.19□□□□□ -2.22
CCDC39-206ENST00000489868 C1QTNF6Q9BXI9 259 aa1.19□□□□□ -2.22
CCDC39-206ENST00000489868 USP42Q9H9J4 1324 aaKnown RBP1.18□□□□□ -2.22
CCDC39-206ENST00000489868 COL6A6A6NMZ7 2263 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 K7EQS6 105 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 POLR3GO15318 223 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-206ENST00000489868 IGHV3-30-3P0DP02 117 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 LYNX1P0DP58 116 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 NQO1P15559 274 aaKnown RBP1.18□□□□□ -2.22
CCDC39-206ENST00000489868 PTNP21246 168 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 LPAR6P43657 344 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 AQP5P55064 265 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 CAVIN4Q5BKX8 364 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 GTF2H4Q92759 462 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 ZNF426Q9BUY5 554 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 C11orf49Q9H6J7 331 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 TMBIM4Q9HC24 238 aa1.18□□□□□ -2.22
CCDC39-206ENST00000489868 IGLV3-9A0A075B6K5 115 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 UBDO15205 165 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 ANGP03950 147 aaKnown RBP1.17□□□□□ -2.22
CCDC39-206ENST00000489868 CD36P16671 472 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 ALOX5APP20292 161 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 VN1R4Q7Z5H5 301 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 OR11L1Q8NGX0 322 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 OR4X1Q8NH49 305 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 ZNRF2Q8NHG8 242 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 SPACA4Q8TDM5 124 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 C16orf78Q8WTQ4 265 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 MITD1Q8WV92 249 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 TMIGD2Q96BF3 282 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 NAP1L5Q96NT1 182 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-206ENST00000489868 FAAP24Q9BTP7 215 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 HINT2Q9BX68 163 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 MRPL32Q9BYC8 188 aaKnown RBP1.17□□□□□ -2.22
CCDC39-206ENST00000489868 IFT46Q9NQC8 304 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 TXNL4BQ9NX01 149 aaKnown RBP1.17□□□□□ -2.22
CCDC39-206ENST00000489868 USH1CQ9Y6N9 552 aa1.17□□□□□ -2.22
CCDC39-206ENST00000489868 PSMD11O00231 422 aa1.16□□□□□ -2.22
CCDC39-206ENST00000489868 CD164Q04900 197 aa1.16□□□□□ -2.22
CCDC39-206ENST00000489868 MRPL51Q4U2R6 128 aaKnown RBP1.16□□□□□ -2.22
CCDC39-206ENST00000489868 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
CCDC39-206ENST00000489868 SELENOHQ8IZQ5 122 aaKnown RBP1.16□□□□□ -2.22
CCDC39-206ENST00000489868 YIPF7Q8N8F6 280 aa1.16□□□□□ -2.22
CCDC39-206ENST00000489868 PECRQ9BY49 303 aa1.16□□□□□ -2.22
CCDC39-206ENST00000489868 OR51E2Q9H255 320 aa1.16□□□□□ -2.22
CCDC39-206ENST00000489868 PRO2289Q9P1D8 64 aa1.16□□□□□ -2.22
CCDC39-206ENST00000489868 FBXL3Q9UKT7 428 aa1.16□□□□□ -2.22
CCDC39-206ENST00000489868 BZW2Q9Y6E2 419 aaKnown RBP1.16□□□□□ -2.22
CCDC39-206ENST00000489868 FN1P02751 2386 aaKnown RBP1.16□□□□□ -2.22
CCDC39-206ENST00000489868 LY6HO94772 140 aa1.15□□□□□ -2.23
CCDC39-206ENST00000489868 CSTAP01040 98 aa1.15□□□□□ -2.23
CCDC39-206ENST00000489868 PEBP1P30086 187 aaKnown RBP1.15□□□□□ -2.23
CCDC39-206ENST00000489868 RPA3P35244 121 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-206ENST00000489868 XIAPP98170 497 aa1.15□□□□□ -2.23
CCDC39-206ENST00000489868 TIMM23BQ5SRD1 257 aa1.15□□□□□ -2.23
CCDC39-206ENST00000489868 OR11H1Q8NG94 326 aa1.15□□□□□ -2.23
CCDC39-206ENST00000489868 ANGPTL6Q8NI99 470 aa1.15□□□□□ -2.23
CCDC39-206ENST00000489868 ZNF471Q9BX82 626 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-206ENST00000489868 HAUS4Q9H6D7 363 aa1.15□□□□□ -2.23
CCDC39-206ENST00000489868 NXT1Q9UKK6 140 aaKnown RBP1.15□□□□□ -2.23
CCDC39-206ENST00000489868 SCML1Q9UN30 329 aa1.15□□□□□ -2.23
CCDC39-206ENST00000489868 RBMX2Q9Y388 322 aaKnown RBP1.15□□□□□ -2.23
CCDC39-206ENST00000489868 NYNRINQ9P2P1 1898 aaKnown RBP1.15□□□□□ -2.23
CCDC39-206ENST00000489868 IGHV3-73A0A0B4J1V6 119 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms