RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 GPR157Q5UAW9 335 aa13.36□□□□□ -0.27
BRD9-208ENST00000489816 PLPPR1Q8TBJ4 325 aa13.36□□□□□ -0.27
BRD9-208ENST00000489816 TINAGQ9UJW2 476 aa13.36□□□□□ -0.27
BRD9-208ENST00000489816 TNRC6AQ8NDV7 1962 aaKnown RBP13.36□□□□□ -0.27
BRD9-208ENST00000489816 TRGV5A0A0B4J1U4 118 aa13.35□□□□□ -0.27
BRD9-208ENST00000489816 WNT9BO14905 357 aa13.35□□□□□ -0.27
BRD9-208ENST00000489816 CDS2O95674 445 aa13.35□□□□□ -0.27
BRD9-208ENST00000489816 ADAM5Q6NVV9 412 aa13.35□□□□□ -0.27
BRD9-208ENST00000489816 DBX2Q6ZNG2 339 aa13.35□□□□□ -0.27
BRD9-208ENST00000489816 RBMXL1Q96E39 390 aaKnown RBP13.35□□□□□ -0.27
BRD9-208ENST00000489816 GINS3Q9BRX5 216 aa13.35□□□□□ -0.27
BRD9-208ENST00000489816 COLCA2A8K830 154 aa13.35□□□□□ -0.27
BRD9-208ENST00000489816 SNRPEP62304 92 aaKnown RBP13.35□□□□□ -0.27
BRD9-208ENST00000489816 AVPI1Q5T686 147 aa13.35□□□□□ -0.27
BRD9-208ENST00000489816 ODF3L1Q8IXM7 274 aa13.35□□□□□ -0.27
BRD9-208ENST00000489816 GPR87Q9BY21 358 aa13.35□□□□□ -0.27
BRD9-208ENST00000489816 KCNJ16Q9NPI9 418 aa13.35□□□□□ -0.27
BRD9-208ENST00000489816 KIR2DS1A0A191URI9 304 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 KIR2DS4P43632 304 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 KIR2DS1Q14954 304 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 FBXW9Q5XUX1 488 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 ZNF573Q86YE8 665 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 TECTBQ96PL2 329 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 PKDREJQ9NTG1 2253 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 AKAP13Q12802 2813 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 NUDT19A8MXV4 375 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 NXPH2O95156 264 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 CD46P15529 392 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 LTC4SQ16873 150 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 ZNF766Q5HY98 468 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 GPR146Q96CH1 333 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 URGCP-MRPS24S4R325 110 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 NBASA2RRP1 2371 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 ZNF727A8MUV8 499 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 M0R296 226 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 IGHV3-13P01766 116 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 IGHV3-7P01780 117 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 METTL15P1P0C7V9 234 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 VDAC1P21796 283 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 F2RP25116 425 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 THNSL2Q86YJ6 484 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 LINC00518Q8N0U6 118 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 ZNF808Q8N4W9 903 aaPredicted RBP13.34□□□□□ -0.27
BRD9-208ENST00000489816 SCCPDHQ8NBX0 429 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 RSG1Q9BU20 258 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 SCRT1Q9BWW7 348 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 PLSCR2Q9NRY7 297 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 TAAR3PQ9P1P4 343 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 CACNG5Q9UF02 275 aa13.34□□□□□ -0.27
BRD9-208ENST00000489816 OR2H2O95918 312 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 SOX8P57073 446 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 WDYHV1Q96HA8 205 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 TRIB1Q96RU8 372 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 PLEKHF2Q9H8W4 249 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 KLF13Q9Y2Y9 288 aaPredicted RBP13.33□□□□□ -0.28
BRD9-208ENST00000489816 OR2W1Q9Y3N9 320 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 A0A1W2PPE3 182 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 FABP6P51161 128 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 NMSQ5H8A3 153 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 SLC25A40Q8TBP6 338 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 TMEM56Q96MV1 263 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 TMEM56-RWDD3S4R434 201 aa13.33□□□□□ -0.28
BRD9-208ENST00000489816 CHD3Q12873 2000 aaKnown RBP13.32□□□□□ -0.28
BRD9-208ENST00000489816 C21orf140B9A014 251 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 MPV17LQ2QL34 196 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 OR1J1Q8NGS3 322 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 RFESDQ8TAC1 157 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 BCL2L2Q92843 193 aaPredicted RBP13.32□□□□□ -0.28
BRD9-208ENST00000489816 OBP2BQ9NPH6 170 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 SMCO4Q9NRQ5 59 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 LINC01387J3KSC0 135 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
BRD9-208ENST00000489816 CEACAM6P40199 344 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 RNPS1Q15287 305 aaKnown RBP13.32□□□□□ -0.28
BRD9-208ENST00000489816 ARV1Q9H2C2 271 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 OR51I2Q9H344 312 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 MSL2Q9HCI7 577 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 LYRM2Q9NU23 88 aaPredicted RBP13.32□□□□□ -0.28
BRD9-208ENST00000489816 UCP1P25874 307 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 FGF8P55075 233 aaPredicted RBP13.32□□□□□ -0.28
BRD9-208ENST00000489816 UBE2NP61088 152 aaKnown RBP13.32□□□□□ -0.28
BRD9-208ENST00000489816 PPP1CBP62140 327 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 SPINK9Q5DT21 86 aa13.32□□□□□ -0.28
BRD9-208ENST00000489816 ZNF324BQ6AW86 544 aaPredicted RBP13.32□□□□□ -0.28
BRD9-208ENST00000489816 H2AFB1P0C5Y9 115 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 MPV17P39210 176 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 PAX9P55771 341 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 MDS2Q8NDY4 140 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 Q8NFD4 153 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 C12orf57Q99622 126 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 SPIN2AQ99865 258 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 SPIN2BQ9BPZ2 258 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 CDH20Q9HBT6 801 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 KPTNQ9Y664 436 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 IGHV3-43A0A0B4J1X8 118 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 DEFB108AA8MXU0 73 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 K7N7A8 449 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 IGHV3-43DP0DP04 118 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 IGHV1-2P23083 117 aa13.31□□□□□ -0.28
BRD9-208ENST00000489816 NRN1LQ496H8 165 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms