RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 KCNIP1Q9NZI2 227 aa14.26□□□□□ -0.13
ABCF3-217ENST00000489719 PDCD6O75340 191 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 UCHL1P09936 223 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 CD28P10747 220 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 IL3RAP26951 378 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 HTR2CP28335 458 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 DEFA6Q01524 100 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 NSUN5P1Q3KNT7 163 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 C1orf100Q5SVJ3 147 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 HIST2H2BDQ6DRA6 164 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 PRR18Q8N4B5 295 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 OR56B4Q8NH76 319 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 KCNG3Q8TAE7 436 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 OCSTAMPQ9BR26 566 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 WNT10AQ9GZT5 417 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 GNG12Q9UBI6 72 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 BLOC1S6Q9UL45 172 aa14.25□□□□□ -0.13
ABCF3-217ENST00000489719 IGHV3-43A0A0B4J1X8 118 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 FAM90A9PA6NNJ1 464 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 C12orf77C9JDV5 145 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 CCRL2O00421 344 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 SC5DO75845 299 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 ARL6IP5O75915 188 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 LPLP06858 475 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 SNRNP70P08621 437 aaKnown RBP14.24□□□□□ -0.13
ABCF3-217ENST00000489719 IGHV3-43DP0DP04 118 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 CPEP16870 476 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 PSMA1P25786 263 aaKnown RBP14.24□□□□□ -0.13
ABCF3-217ENST00000489719 LOXL3P58215 753 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 MLLT11Q13015 90 aaPredicted RBP14.24□□□□□ -0.13
ABCF3-217ENST00000489719 DIAPH2-AS1Q14236 149 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 HNF4GQ14541 408 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 TMEM30BQ3MIR4 351 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 C9orf152Q5JTZ5 239 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 NKAPLQ5M9Q1 402 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 SIGIRRQ6IA17 410 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 OR10K2Q6IF99 312 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 MOB3BQ86TA1 216 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 LINC00311Q8N616 119 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 C8orf31Q8N9H6 132 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 MGLLQ99685 303 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 RAB26Q9ULW5 256 aa14.24□□□□□ -0.13
ABCF3-217ENST00000489719 HBZP02008 142 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 VSIG8P0DPA2 414 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 TMEM11P17152 192 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 RCC1P18754 421 aaPredicted RBP14.23□□□□□ -0.13
ABCF3-217ENST00000489719 RANBP1P43487 201 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 MAP2K4P45985 399 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 RPS25P62851 125 aaKnown RBP14.23□□□□□ -0.13
ABCF3-217ENST00000489719 TMEM95Q3KNT9 176 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 Q3ZCU0 254 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 TMEM91Q6ZNR0 172 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 LYG1Q8N1E2 194 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 GAPTQ8N292 157 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 OR5AU1Q8NGC0 362 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 OR6M1Q8NGM8 313 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 TMEM59Q9BXS4 323 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 PLGRKTQ9HBL7 147 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 MOB4Q9Y3A3 225 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 LRRC42Q9Y546 428 aa14.23□□□□□ -0.13
ABCF3-217ENST00000489719 A0A1W2PPI3 338 aa14.22□□□□□ -0.13
ABCF3-217ENST00000489719 HSD17B6O14756 317 aa14.22□□□□□ -0.13
ABCF3-217ENST00000489719 SLC22A1O15245 554 aa14.22□□□□□ -0.13
ABCF3-217ENST00000489719 CD37P11049 281 aa14.22□□□□□ -0.13
ABCF3-217ENST00000489719 REG1BP48304 166 aa14.22□□□□□ -0.13
ABCF3-217ENST00000489719 RPS27AP62979 156 aaKnown RBP14.22□□□□□ -0.13
ABCF3-217ENST00000489719 ZNF816Q0VGE8 651 aaPredicted RBP14.22□□□□□ -0.13
ABCF3-217ENST00000489719 NDUFA11Q86Y39 141 aa14.22□□□□□ -0.13
ABCF3-217ENST00000489719 OR1L1Q8NH94 360 aa14.22□□□□□ -0.13
ABCF3-217ENST00000489719 CITED2Q99967 270 aaPredicted RBP14.22□□□□□ -0.13
ABCF3-217ENST00000489719 TAF9BQ9HBM6 251 aa14.22□□□□□ -0.13
ABCF3-217ENST00000489719 ACOT13Q9NPJ3 140 aa14.22□□□□□ -0.13
ABCF3-217ENST00000489719 OR2S2Q9NQN1 319 aa14.22□□□□□ -0.13
ABCF3-217ENST00000489719 AK6Q9Y3D8 172 aaKnown RBP14.22□□□□□ -0.13
ABCF3-217ENST00000489719 IGHV1-3A0A0C4DH29 117 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 SH2D7A6NKC9 451 aaPredicted RBP14.21□□□□□ -0.13
ABCF3-217ENST00000489719 WIPF1O43516 503 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 ATP6V1G2O95670 118 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 BPNT1O95861 308 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 IGKV1D-33P01593 117 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 IGKV1-33P01594 117 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 AMY1AP04745 511 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 AMY2AP04746 511 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 PSMD7P51665 324 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 FBLN7Q53RD9 439 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 FAM53AQ6NSI3 398 aaPredicted RBP14.21□□□□□ -0.13
ABCF3-217ENST00000489719 ZNF554Q86TJ5 538 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 OR10V1Q8NGI7 309 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 WIPF2Q8TF74 440 aaPredicted RBP14.21□□□□□ -0.13
ABCF3-217ENST00000489719 URM1Q9BTM9 101 aaKnown RBP14.21□□□□□ -0.13
ABCF3-217ENST00000489719 FAAP24Q9BTP7 215 aa14.21□□□□□ -0.13
ABCF3-217ENST00000489719 KCNAB3O43448 404 aa14.2□□□□□ -0.14
ABCF3-217ENST00000489719 OPN1MWP04001 364 aa14.2□□□□□ -0.14
ABCF3-217ENST00000489719 OPN1MW2P0DN77 364 aa14.2□□□□□ -0.14
ABCF3-217ENST00000489719 OPN1MW3P0DN78 364 aa14.2□□□□□ -0.14
ABCF3-217ENST00000489719 ARSBP15848 533 aa14.2□□□□□ -0.14
ABCF3-217ENST00000489719 CALRP27797 417 aaKnown RBP14.2□□□□□ -0.14
ABCF3-217ENST00000489719 CHATP28329 748 aa14.2□□□□□ -0.14
ABCF3-217ENST00000489719 BLVRBP30043 206 aaPredicted RBP14.2□□□□□ -0.14
ABCF3-217ENST00000489719 P2RY14Q15391 338 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms