RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 PRDM13Q9H4Q3 707 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 RBMX2Q9Y388 322 aaKnown RBP8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 MAB21L2Q9Y586 359 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 KPTNQ9Y664 436 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 CENPVL3A0A0U1RRI6 287 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 PDCD6O75340 191 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 CCNKO75909 580 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 OR7C1O76099 320 aaPredicted RBP8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 MELTFP08582 738 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 HKR1P10072 659 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 HIST1H1DP16402 221 aaKnown RBP8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 BLVRBP30043 206 aaPredicted RBP8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 PRDX2P32119 198 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 RCVRNP35243 200 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 GDNFP39905 211 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 OR3A1P47881 315 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 ARF6P62330 175 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 COL10A1Q03692 680 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 FOXL1Q12952 345 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 IKZF1Q13422 519 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 SLC9A3R2Q15599 337 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 AWAT1Q58HT5 328 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 DOCK11Q5JSL3 2073 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 BRICD5Q6PL45 260 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 C6orf201Q7Z4U5 140 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 FGFRL1Q8N441 504 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 KIR3DL3Q8N743 410 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 LY6G5BQ8NDX9 201 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 OR56B1Q8NGI3 324 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 PLPPR1Q8TBJ4 325 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 DUX5Q96PT3 197 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 DCTN5Q9BTE1 182 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 AUNIPQ9H7T9 357 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 OR14J1Q9UGF5 321 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 HSF4Q9ULV5 492 aa8.67□□□□□ -1.02
SCAMP4-208ENST00000489554 TRAV18A0A075B6X5 111 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 IGHV1-69DA0A0B4J2H0 117 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 SIRPB1O00241 398 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 SIGLEC5O15389 551 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 SSX5O60225 188 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 SNAPC5O75971 98 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 IGHV1-69P01742 117 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 CD3GP09693 182 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 SPNP16150 400 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 GNB3P16520 340 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 FUT3P21217 361 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 DGCR2P98153 550 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 KLF9Q13886 244 aaPredicted RBP8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 DEFB112Q30KQ8 113 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 GAPTQ8N292 157 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 TMEM86BQ8N661 226 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 SUMF2Q8NBJ7 301 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 OR4S1Q8NGB4 309 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 OR56B4Q8NH76 319 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 C8orf46Q8TAG6 207 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 H1FXQ92522 213 aaKnown RBP8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 DYRK2Q92630 601 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 LHX4Q969G2 390 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 RAB3CQ96E17 227 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 NEDD4LQ96PU5 975 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 ING3Q9NXR8 418 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 ONECUT1Q9UBC0 465 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 SLC25A10Q9UBX3 287 aaPredicted RBP8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 MTFP1Q9UDX5 166 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 ZNF221Q9UK13 617 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 SOX21Q9Y651 276 aaPredicted RBP8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 DSCAML1Q8TD84 2053 aa8.66□□□□□ -1.02
SCAMP4-208ENST00000489554 MDFIC2A0A1B0GVS7 189 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 ANKRD20A5PA0PJZ0 165 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 TMEM235A6NFC5 223 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 H3BUI4 141 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 SH2D1BO14796 132 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 DEGS1O15121 323 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 HOXA3O43365 443 aaPredicted RBP8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 TCRBP04435 133 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 GLAP06280 429 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 LPLP06858 475 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 AKAIN1P0CW23 69 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 ZNF44P15621 663 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 GABRA2P47869 451 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 EIF2B2P49770 351 aaKnown RBP8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 TAS2R19P59542 299 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 PAX5Q02548 391 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 GUCA2AQ02747 115 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 CDNFQ49AH0 187 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 PLA1AQ53H76 456 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 NKAPLQ5M9Q1 402 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 RUSC1-AS1Q66K80 236 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 Q6YL49 198 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 C1orf122Q6ZSJ8 110 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 Q6ZTK2 550 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 VMO1Q7Z5L0 202 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 CHST4Q8NCG5 386 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 ZNRF1Q8ND25 227 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 OR52I2Q8NH67 350 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 COQ2Q96H96 371 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 HDHD3Q9BSH5 251 aaPredicted RBP8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 FAAP24Q9BTP7 215 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms