RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 UBE2UQ5VVX9 321 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 C16orf82Q7Z2V1 217 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 TMEM219Q86XT9 240 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 TM2D1Q9BX74 207 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 PRSS22Q9GZN4 317 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 TRAV1-2A0A0B4J238 106 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 TRDV1A0A1B0GX56 115 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 TMEM14DPA8MWL7 114 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 C15orf65H3BRN8 121 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 TIMM23O14925 209 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 CHST1O43916 411 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 PEX14O75381 377 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 LPLP06858 475 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 FAM106CPP0CH98 169 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 BLVRBP30043 206 aaPredicted RBP11.49□□□□□ -0.57
BRCA1-218ENST00000489037 RAB7AP51149 207 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 SIGIRRQ6IA17 410 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 ZNF773Q6PK81 442 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 PRR18Q8N4B5 295 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 ZNF696Q9H7X3 374 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 CHMP1AQ9HD42 196 aaPredicted RBP11.49□□□□□ -0.57
BRCA1-218ENST00000489037 PLEKHJ1Q9NW61 149 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 GFOD1Q9NXC2 390 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 GNG12Q9UBI6 72 aa11.49□□□□□ -0.57
BRCA1-218ENST00000489037 C12orf77C9JDV5 145 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 LY6LH3BQJ8 138 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 JUNBP17275 347 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-218ENST00000489037 CHATP28329 748 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 UNC119Q13432 240 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 Q3ZCU0 254 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 CD200R1LQ6Q8B3 271 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 CCBE1Q6UXH8 406 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-218ENST00000489037 Q6ZTK2 550 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 ZNF554Q86TJ5 538 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 OR8H3Q8N146 312 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 GAPTQ8N292 157 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 OR51D1Q8NGF3 324 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 UBALD1Q8TB05 177 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 FAM3DQ96BQ1 224 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 CITED1Q99966 193 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 FAAP24Q9BTP7 215 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 LIN7BQ9HAP6 207 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 ABRACLQ9P1F3 81 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 STEAP1Q9UHE8 339 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 SSR3Q9UNL2 185 aa11.48□□□□□ -0.57
BRCA1-218ENST00000489037 TET2Q6N021 2002 aaPredicted RBP11.47□□□□□ -0.57
BRCA1-218ENST00000489037 IGHV3-43A0A0B4J1X8 118 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 A0A1W2PPE3 182 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 M0QZ24 198 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 HBZP02008 142 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 GAPDHP04406 335 aaKnown RBP11.47□□□□□ -0.57
BRCA1-218ENST00000489037 IGHV3-43DP0DP04 118 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 RCC1P18754 421 aaPredicted RBP11.47□□□□□ -0.57
BRCA1-218ENST00000489037 RAB3BP20337 219 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 QRFPP83859 136 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 SRSF4Q08170 494 aaKnown RBP11.47□□□□□ -0.57
BRCA1-218ENST00000489037 C2orf76Q3KRA6 126 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 HES5Q5TA89 166 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 C22orf42Q6IC83 251 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 C6orf201Q7Z4U5 140 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 LINC00311Q8N616 119 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 C8orf31Q8N9H6 132 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 OR56B1Q8NGI3 324 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 MRPL30Q8TCC3 161 aaKnown RBP11.47□□□□□ -0.57
BRCA1-218ENST00000489037 GFI1Q99684 422 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 SULT4A1Q9BR01 284 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 OCSTAMPQ9BR26 566 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 NICN1Q9BSH3 213 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 LPAR5Q9H1C0 372 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 RIMS4Q9H426 269 aaPredicted RBP11.47□□□□□ -0.57
BRCA1-218ENST00000489037 KCNK15Q9H427 330 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 TAF9BQ9HBM6 251 aa11.47□□□□□ -0.57
BRCA1-218ENST00000489037 RGS11O94810 467 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 CD24P25063 80 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 EFNB2P52799 333 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 CLDN12P56749 244 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 LOXL3P58215 753 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 HES1Q14469 280 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 KCTD21Q4G0X4 260 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 PRR31Q5SQ13 230 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 UTF1Q5T230 341 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 THNSL2Q86YJ6 484 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 OR1L1Q8NH94 360 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 SETD6Q8TBK2 473 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 GALMQ96C23 342 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 SLC25A33Q9BSK2 321 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 OR2S2Q9NQN1 319 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 MBNL3Q9NUK0 354 aaKnown RBP11.46□□□□□ -0.57
BRCA1-218ENST00000489037 RAB22AQ9UL26 194 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 STUB1Q9UNE7 303 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 SIGLEC9Q9Y336 463 aa11.46□□□□□ -0.57
BRCA1-218ENST00000489037 M0QZK8 103 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 HSD17B6O14756 317 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 SOCS1O15524 211 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 OR2F2O95006 317 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 VSIG10L2P0DP72 767 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 FGF9P31371 208 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-218ENST00000489037 VEGFCP49767 419 aa11.45□□□□□ -0.58
BRCA1-218ENST00000489037 MRPS15P82914 257 aaKnown RBP11.45□□□□□ -0.58
BRCA1-218ENST00000489037 HERPUD1Q15011 391 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms