RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SDCBPO00560 298 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 SPINT2O43291 252 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 CRTAPO75718 401 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 IGHV3-7P01780 117 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 GLAP06280 429 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 LPLP06858 475 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 SNRNP70P08621 437 aaKnown RBP11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 UBBP0CG47 229 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 MGMTP16455 207 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 IL3RAP26951 378 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 ZNF816Q0VGE8 651 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 GPR50Q13585 617 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 HES1Q14469 280 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 UTF1Q5T230 341 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 RAB12Q6IQ22 244 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 CENPVQ7Z7K6 275 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 LINC00311Q8N616 119 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 C8orf31Q8N9H6 132 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 OR5AU1Q8NGC0 362 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 R3HDM4Q96D70 268 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 MGLLQ99685 303 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 MRPS26Q9BYN8 205 aaKnown RBP11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 SELENOIQ9C0D9 397 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 ISYNA1Q9NPH2 558 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 ETAA1Q9NY74 926 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 SCOCQ9UIL1 159 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 TRAPPC2LQ9UL33 140 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 C15orf65H3BRN8 121 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 HSD17B6O14756 317 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 PIN1P1O15428 100 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 MT-ND4P03905 459 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 TMEM11P17152 192 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 PSMB9P28065 219 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 NEDD8Q15843 81 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 ACSM3Q53FZ2 586 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 C9orf152Q5JTZ5 239 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 HIST2H2BDQ6DRA6 164 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 LYPD6Q86Y78 171 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 LYG1Q8N1E2 194 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 DRAM1Q8N682 238 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 OR4X2Q8NGF9 303 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 CCDC107Q8WV48 283 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 PHYHIPQ92561 330 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 UFD1Q92890 307 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 Q96M66 194 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 BANF2Q9H503 90 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 GFOD1Q9NXC2 390 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 PEX16Q9Y5Y5 336 aa11.01□□□□□ -0.65
SPTLC1-207ENST00000488921 CCRL2O00421 344 aa11□□□□□ -0.65
SPTLC1-207ENST00000488921 FGF16O43320 207 aa11□□□□□ -0.65
SPTLC1-207ENST00000488921 TXNL1O43396 289 aa11□□□□□ -0.65
SPTLC1-207ENST00000488921 SC5DO75845 299 aa11□□□□□ -0.65
SPTLC1-207ENST00000488921 GAPDHP04406 335 aaKnown RBP11□□□□□ -0.65
SPTLC1-207ENST00000488921 FUT3P21217 361 aa11□□□□□ -0.65
SPTLC1-207ENST00000488921 MLLT11Q13015 90 aaPredicted RBP11□□□□□ -0.65
SPTLC1-207ENST00000488921 SYT6Q5T7P8 510 aaPredicted RBP11□□□□□ -0.65
SPTLC1-207ENST00000488921 UBE2UQ5VVX9 321 aa11□□□□□ -0.65
SPTLC1-207ENST00000488921 GLT8D1Q68CQ7 371 aa11□□□□□ -0.65
SPTLC1-207ENST00000488921 GAPTQ8N292 157 aa11□□□□□ -0.65
SPTLC1-207ENST00000488921 TMED9Q9BVK6 235 aa11□□□□□ -0.65
SPTLC1-207ENST00000488921 LSM2Q9Y333 95 aaKnown RBP11□□□□□ -0.65
SPTLC1-207ENST00000488921 NOTCH1P46531 2555 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 IGHV1-3A0A0C4DH29 117 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 A0A1W2PPE3 182 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 ADARB2-AS1A8MUL3 147 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 C12orf77C9JDV5 145 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 PDCD6O75340 191 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 IGKV1D-33P01593 117 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 IGKV1-33P01594 117 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 AMY1AP04745 511 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 AMY2AP04746 511 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 LOXL3P58215 753 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 CD83Q01151 205 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 HSD17B12Q53GQ0 312 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 FBLN7Q53RD9 439 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 UNQ9370/PRO34162Q6UXP9 181 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 ZNF554Q86TJ5 538 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 C1QL4Q86Z23 238 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 IZUMO1Q8IYV9 350 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 TMEM104Q8NE00 496 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 OR4K15Q8NH41 348 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 FAM46BQ96A09 425 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 GNG12Q9UBI6 72 aa10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 TSSC4Q9Y5U2 329 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 PRKDCP78527 4128 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-207ENST00000488921 IGHV3-43A0A0B4J1X8 118 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 MPIG6BO95866 241 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 HBZP02008 142 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 IGHV3-43DP0DP04 118 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 PF4V1P10720 104 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 TPBGQ13641 420 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 DIAPH2-AS1Q14236 149 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 TRAM1Q15629 374 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 SAMD5Q5TGI4 173 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 LIPKQ5VXJ0 399 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 MOB3BQ86TA1 216 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 PRR18Q8N4B5 295 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 C5orf56Q8N8D9 126 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 UBALD1Q8TB05 177 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 TMEM59Q9BXS4 323 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms