RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 P2RY14Q15391 338 aa12.78□□□□□ -0.36
CTDSP1-209ENST00000488627 Q6ZS46 218 aa12.78□□□□□ -0.36
CTDSP1-209ENST00000488627 FAM89BQ8N5H3 189 aa12.78□□□□□ -0.36
CTDSP1-209ENST00000488627 OR4C13Q8NGP0 309 aa12.78□□□□□ -0.36
CTDSP1-209ENST00000488627 MRPL30Q8TCC3 161 aaKnown RBP12.78□□□□□ -0.36
CTDSP1-209ENST00000488627 SULT4A1Q9BR01 284 aa12.78□□□□□ -0.36
CTDSP1-209ENST00000488627 LPAR5Q9H1C0 372 aa12.78□□□□□ -0.36
CTDSP1-209ENST00000488627 GFOD1Q9NXC2 390 aa12.78□□□□□ -0.36
CTDSP1-209ENST00000488627 TRAPPC2LQ9UL33 140 aa12.78□□□□□ -0.36
CTDSP1-209ENST00000488627 NBEAL1Q6ZS30 2694 aa12.77□□□□□ -0.36
CTDSP1-209ENST00000488627 MGAM2Q2M2H8 2515 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 TRAV1-2A0A0B4J238 106 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 A0A1W2PPE3 182 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 FAM90A9PA6NNJ1 464 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 SDCBPO00560 298 aaPredicted RBP12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 LDLRAD4O15165 306 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 ARSBP15848 533 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 GALP22466 123 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 BRS3P32247 399 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 GNG10P50151 68 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 BLCAPP62952 87 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 Q6ZPA2 131 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 OR2W3Q7Z3T1 314 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 C6orf201Q7Z4U5 140 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 C5orf24Q7Z6I8 188 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 LINC00311Q8N616 119 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 C8orf31Q8N9H6 132 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 NEDD4LQ96PU5 975 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 FAAP24Q9BTP7 215 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 PLGRKTQ9HBL7 147 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 SERTAD4Q9NUC0 356 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 V9GY05 133 aa12.77□□□□□ -0.37
CTDSP1-209ENST00000488627 IGHV3-43A0A0B4J1X8 118 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 A0A1W2PPI3 338 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 FOXI3A8MTJ6 420 aaPredicted RBP12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 CCRL2O00421 344 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 HBZP02008 142 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 IGHV3-43DP0DP04 118 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 CLDN12P56749 244 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 MADCAM1Q13477 382 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 HABP2Q14520 560 aaPredicted RBP12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 RAB11BQ15907 218 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 C2orf76Q3KRA6 126 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 Q3ZCU0 254 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 NKAPLQ5M9Q1 402 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 C6orf183Q5T699 404 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 CCDC144NLQ6NUI1 221 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 ZNF773Q6PK81 442 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 THNSL2Q86YJ6 484 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 ZNF439Q8NDP4 499 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 OR51D1Q8NGF3 324 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 OR1L1Q8NH94 360 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 RPEQ96AT9 228 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 FAM3DQ96BQ1 224 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 TAF9BQ9HBM6 251 aa12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 AMMECR1Q9Y4X0 333 aaPredicted RBP12.76□□□□□ -0.37
CTDSP1-209ENST00000488627 SOCS1O15524 211 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 SPINT2O43291 252 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 BLVRBP30043 206 aaPredicted RBP12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 PSMD7P51665 324 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 ZNF134P52741 427 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 TMEM50BP56557 158 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 OR10A3P58181 314 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 C11orf88Q6PI97 169 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 ZNF554Q86TJ5 538 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 NR2C2APQ86WQ0 139 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 OR2T6Q8NHC8 308 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 CFHR4Q92496 578 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 FCGR1BQ92637 280 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 TOMM40LQ969M1 308 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 ST6GALNAC6Q969X2 333 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 OCSTAMPQ9BR26 566 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 LIN7BQ9HAP6 207 aa12.75□□□□□ -0.37
CTDSP1-209ENST00000488627 TIMM23O14925 209 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 SLC31A2O15432 143 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 NAPSAO96009 420 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 AMY1AP04745 511 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 AMY2AP04746 511 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 PSMB9P28065 219 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 MNDAP41218 407 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 ARHGDIBP52566 201 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 PLA2G7Q13093 441 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 CT45A1Q5HYN5 189 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 C22orf42Q6IC83 251 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 ZNF880Q6PDB4 577 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 TRAT1Q6PIZ9 186 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 SLC25A48Q6ZT89 311 aaKnown RBP12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 C16orf82Q7Z2V1 217 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 DRAM1Q8N682 238 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 DTX3Q8N9I9 347 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 OR10X1Q8NGY0 326 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 CT45A3Q8NHU0 189 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 WIPF2Q8TF74 440 aaPredicted RBP12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 RBM14Q96PK6 669 aaKnown RBP12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 PRSS22Q9GZN4 317 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 STEAP1Q9UHE8 339 aa12.74□□□□□ -0.37
CTDSP1-209ENST00000488627 TMEM272A0A1B0GTI8 110 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 IFITM5A6NNB3 132 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 OR2F2O95006 317 aa12.73□□□□□ -0.37
CTDSP1-209ENST00000488627 FGF9P31371 208 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms