RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 GP2P55259 537 aaKnown RBP12.04□□□□□ -0.48
TRIM50-203ENST00000488217 DGCR2P98153 550 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 DCTN2Q13561 401 aaKnown RBP12.04□□□□□ -0.48
TRIM50-203ENST00000488217 GPR176Q14439 515 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 KIR2DS1Q14954 304 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 FAM53AQ6NSI3 398 aaPredicted RBP12.04□□□□□ -0.48
TRIM50-203ENST00000488217 IZUMO1Q8IYV9 350 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 STX19Q8N4C7 294 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 Q8N9W7 124 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 TMEM104Q8NE00 496 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 ZNF555Q8NEP9 628 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 UBALD1Q8TB05 177 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 NEK7Q8TDX7 302 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 RTN4IP1Q8WWV3 396 aaPredicted RBP12.04□□□□□ -0.48
TRIM50-203ENST00000488217 ORAI1Q96D31 301 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 RAX2Q96IS3 184 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 DUX3Q96PT4 197 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 S1PR3Q99500 378 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 RASL11BQ9BPW5 248 aa12.04□□□□□ -0.48
TRIM50-203ENST00000488217 NBEAL2Q6ZNJ1 2754 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 COL7A1Q02388 2944 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 IGHV3-43A0A0B4J1X8 118 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 A0A1W2PP11 408 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 ZNF736B4DX44 427 aaPredicted RBP12.03□□□□□ -0.48
TRIM50-203ENST00000488217 MCRIP1C9JLW8 97 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 RAMP3O60896 148 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 RPLP1P05386 114 aaKnown RBP12.03□□□□□ -0.48
TRIM50-203ENST00000488217 IGHV3-43DP0DP04 118 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 IGFBP3P17936 291 aaPredicted RBP12.03□□□□□ -0.48
TRIM50-203ENST00000488217 CDX1P47902 265 aaPredicted RBP12.03□□□□□ -0.48
TRIM50-203ENST00000488217 ZNF134P52741 427 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 GPR50Q13585 617 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 Q3ZCU0 254 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 OR8H1Q8NGG4 311 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 TFAP2CQ92754 450 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 MRPS24Q96EL2 167 aaKnown RBP12.03□□□□□ -0.48
TRIM50-203ENST00000488217 RDH12Q96NR8 316 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 ZNF184Q99676 751 aaPredicted RBP12.03□□□□□ -0.48
TRIM50-203ENST00000488217 SPACA1Q9HBV2 294 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 SMPD3Q9NY59 655 aaPredicted RBP12.03□□□□□ -0.48
TRIM50-203ENST00000488217 CLEC2DQ9UHP7 191 aa12.03□□□□□ -0.48
TRIM50-203ENST00000488217 RYR3Q15413 4870 aa12.02□□□□□ -0.48
TRIM50-203ENST00000488217 IRGMA1A4Y4 181 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 C12orf77C9JDV5 145 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 AIPO00170 330 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 SPINT2O43291 252 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 ELANEP08246 267 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 VHLP40337 213 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 F2RL1P55085 397 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 FOXE3Q13461 319 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 CT45A1Q5HYN5 189 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 CXorf66Q5JRM2 361 aaPredicted RBP12.02□□□□□ -0.49
TRIM50-203ENST00000488217 SYT6Q5T7P8 510 aaPredicted RBP12.02□□□□□ -0.49
TRIM50-203ENST00000488217 STEAP3Q658P3 488 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 DMKNQ6E0U4 476 aaPredicted RBP12.02□□□□□ -0.49
TRIM50-203ENST00000488217 LCNL1Q6ZST4 164 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 RNF152Q8N8N0 203 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 CT45A3Q8NHU0 189 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 SMIM19Q96E16 107 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 VCXQ9H320 206 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 RAB9BQ9NP90 201 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 CHCHD3Q9NX63 227 aaKnown RBP12.02□□□□□ -0.49
TRIM50-203ENST00000488217 CKLFQ9UBR5 152 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 TRAPPC2LQ9UL33 140 aa12.02□□□□□ -0.49
TRIM50-203ENST00000488217 DIMT1Q9UNQ2 313 aaKnown RBP12.02□□□□□ -0.49
TRIM50-203ENST00000488217 TRBV5-5A0A0J9YX44 114 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 SLC31A2O15432 143 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 LALBAP00709 142 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 VSIG8P0DPA2 414 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 MYL12AP19105 171 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 SOX6P35712 828 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 RAB25P57735 213 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 RPS11P62280 158 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRIM50-203ENST00000488217 Q499Y3 187 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 YIF1BQ5BJH7 314 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 GLIPR1L1Q6UWM5 242 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 SLC25A48Q6ZT89 311 aaKnown RBP12.01□□□□□ -0.49
TRIM50-203ENST00000488217 CDH26Q8IXH8 852 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 ZNF439Q8NDP4 499 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 OR13C5Q8NGS8 318 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 TMEM80Q96HE8 168 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 WWC2-AS2Q96NR7 200 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 VCX3BQ9H321 246 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 RCC2Q9P258 522 aaKnown RBP12.01□□□□□ -0.49
TRIM50-203ENST00000488217 GNG12Q9UBI6 72 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 EXOSC1Q9Y3B2 195 aaKnown RBP12.01□□□□□ -0.49
TRIM50-203ENST00000488217 PEX16Q9Y5Y5 336 aa12.01□□□□□ -0.49
TRIM50-203ENST00000488217 TRAV8-7A0A075B6U6 113 aa12□□□□□ -0.49
TRIM50-203ENST00000488217 A0A1W2PPK0 400 aa12□□□□□ -0.49
TRIM50-203ENST00000488217 TXNL1O43396 289 aa12□□□□□ -0.49
TRIM50-203ENST00000488217 NHLRC4P0CG21 123 aaPredicted RBP12□□□□□ -0.49
TRIM50-203ENST00000488217 ZNF137PP52743 207 aa12□□□□□ -0.49
TRIM50-203ENST00000488217 C6orf183Q5T699 404 aa12□□□□□ -0.49
TRIM50-203ENST00000488217 RAB12Q6IQ22 244 aa12□□□□□ -0.49
TRIM50-203ENST00000488217 GAPTQ8N292 157 aa12□□□□□ -0.49
TRIM50-203ENST00000488217 OR5M8Q8NGP6 311 aa12□□□□□ -0.49
TRIM50-203ENST00000488217 OR8U1Q8NH10 309 aa12□□□□□ -0.49
TRIM50-203ENST00000488217 OR4K15Q8NH41 348 aa12□□□□□ -0.49
TRIM50-203ENST00000488217 ETAA1Q9NY74 926 aa12□□□□□ -0.49
TRIM50-203ENST00000488217 MAGEA13PA6NCF6 341 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms