RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 GHITMQ9H3K2 345 aa6.4□□□□□ -1.38
NECTIN3-209ENST00000488016 HES4Q9HCC6 221 aa6.4□□□□□ -1.38
NECTIN3-209ENST00000488016 SIRT7Q9NRC8 400 aa6.4□□□□□ -1.38
NECTIN3-209ENST00000488016 C19orf12Q9NSK7 152 aa6.4□□□□□ -1.38
NECTIN3-209ENST00000488016 ONECUT1Q9UBC0 465 aa6.4□□□□□ -1.38
NECTIN3-209ENST00000488016 SLC25A10Q9UBX3 287 aaPredicted RBP6.4□□□□□ -1.38
NECTIN3-209ENST00000488016 RPUSD1Q9UJJ7 312 aaKnown RBP6.4□□□□□ -1.38
NECTIN3-209ENST00000488016 A0A0A6YYH2 397 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 KIR2DS1A0A191URI9 304 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 A6NJ64 397 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 SNRPGP15A8MWD9 76 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 SIRPB1O00241 398 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 NDUFB3O43676 98 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 ENSAO43768 121 aaKnown RBP6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 NOS1APO75052 506 aaPredicted RBP6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 RBBP9O75884 186 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 VENTXO95231 258 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 IFNA7P01567 189 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 MAS1P04201 325 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 EIF4EP06730 217 aaKnown RBP6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 MMP9P14780 707 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 CCL3L1P16619 93 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 PAX6P26367 422 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 PRDX2P32119 198 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 RAB14P61106 215 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 PDZK1IP1Q13113 114 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 ZNF273Q14593 569 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 KISS1Q15726 138 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 FAM189A2Q15884 450 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 SMIM21Q3B7S5 101 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 KRTAP24-1Q3LI83 254 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 ATPAF1Q5TC12 328 aaPredicted RBP6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 ZNF529Q6P280 563 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 BTNL3Q6UXE8 466 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 LHFPL2Q6ZUX7 228 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 SLC36A1Q7Z2H8 476 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 SERPINA12Q8IW75 414 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 FAM185AQ8N0U4 392 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 Q8N7P7 452 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 CCDC54Q8NEL0 328 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 ZNF431Q8TF32 576 aaPredicted RBP6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 LHX4Q969G2 390 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 FOXRED1Q96CU9 486 aaPredicted RBP6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 C10orf35Q96D05 121 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 SDSLQ96GA7 329 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 DCTN5Q9BTE1 182 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 KCNK15Q9H427 330 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 NOX4Q9NPH5 578 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 ESM1Q9NQ30 184 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 KAAG1Q9UBP8 84 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 ZNF107Q9UII5 783 aaPredicted RBP6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 SCP2D1Q9UJQ7 156 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 MRPS7Q9Y2R9 242 aaKnown RBP6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 POLDIP2Q9Y2S7 368 aa6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 RBMX2Q9Y388 322 aaKnown RBP6.39□□□□□ -1.39
NECTIN3-209ENST00000488016 TRBV5-7A0A0A0MS05 114 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 A0A0A6YYJ9 748 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 PPIAL4CA0A0B4J2A2 164 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 J3QLI3 93 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 HSPB6O14558 160 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 KCNAB3O43448 404 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 XRCC3O43542 346 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 NDUFA2O43678 99 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 ZNF780AO75290 641 aaPredicted RBP6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 ZNF737O75373 536 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 SCGNO76038 276 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 HAND1O96004 215 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 CD2P06729 351 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 PPIAL4GP0DN37 164 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 TMEM225BP0DP42 221 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 IGFBP3P17936 291 aaPredicted RBP6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 RAB3AP20336 220 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 PRKACBP22694 351 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 NPY4RP50391 375 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 MECP2P51608 486 aaKnown RBP6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 NKX2-5P52952 324 aaPredicted RBP6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 EDDM3AQ14507 147 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 PIGYQ3MUY2 71 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 LRRC10Q5BKY1 277 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 C17orf107Q6ZR85 190 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 TCF23Q7RTU1 214 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 VMO1Q7Z5L0 202 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 FAM58AQ8N1B3 248 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 SIGLECL1Q8N7X8 197 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 LY6G5BQ8NDX9 201 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 OR4S1Q8NGB4 309 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 TNFAIP8L1Q8WVP5 186 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 SPSB1Q96BD6 273 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 WWC2-AS2Q96NR7 200 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 DERL3Q96Q80 235 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 FYTTD1Q96QD9 318 aaKnown RBP6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 GPER1Q99527 375 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 SIRPDQ9H106 197 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 ALX4Q9H161 411 aaPredicted RBP6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 TNFRSF19Q9NS68 423 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 FOXJ3Q9UPW0 622 aa6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 AK6Q9Y3D8 172 aaKnown RBP6.38□□□□□ -1.39
NECTIN3-209ENST00000488016 MEIKINA0A087WXM9 373 aa6.37□□□□□ -1.39
NECTIN3-209ENST00000488016 CENPVL3A0A0U1RRI6 287 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms