RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 GATCO43716 136 aaKnown RBP2.22□□□□□ -2.05
USP48-209ENST00000487880 KLRC4O43908 158 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 ALOX12BO75342 701 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 OR2A4O95047 310 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 CRYZL1O95825 349 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 CD9P21926 228 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 NUDT2P50583 147 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 BLVRAP53004 296 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 B2MP61769 119 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 S100A12P80511 92 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 KRR1Q13601 381 aaKnown RBP2.22□□□□□ -2.05
USP48-209ENST00000487880 ENDOGQ14249 297 aaKnown RBP2.22□□□□□ -2.05
USP48-209ENST00000487880 KCNJ8Q15842 424 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 C4orf22Q6V702 233 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 IDO2Q6ZQW0 420 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 RPRMLQ8N4K4 120 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 OR8A1Q8NGG7 326 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 OR51L1Q8NGJ5 315 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 S100ZQ8WXG8 99 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 KIAA1143Q96AT1 154 aaPredicted RBP2.22□□□□□ -2.05
USP48-209ENST00000487880 OR2A7Q96R45 310 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 CHID1Q9BWS9 393 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 ABCG5Q9H222 651 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 DSN1Q9H410 356 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 LRRC19Q9H756 370 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 PARP11Q9NR21 331 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 PARVAQ9NVD7 372 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 STMN3Q9NZ72 180 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 PSMD13Q9UNM6 376 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 ATRNO75882 1429 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 DYSFO75923 2080 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 NALCNQ8IZF0 1738 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 FLT4P35916 1363 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 MYO5BQ9ULV0 1848 aa2.21□□□□□ -2.05
USP48-209ENST00000487880 RIMBP3CA6NJZ7 1639 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 RIMBP3BA6NNM3 1639 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 LRP6O75581 1613 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 RIMBP3Q9UFD9 1639 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 FAM25AB3EWG3 89 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 FAM25CB3EWG5 89 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 FAM25GB3EWG6 89 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 K7EPK0 472 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 TECPR2O15040 1411 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 GMDSO60547 372 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 CIAO1O76071 339 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 S100A6P06703 90 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 SERPINA6P08185 405 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 COILP38432 576 aaPredicted RBP2.21□□□□□ -2.06
USP48-209ENST00000487880 HTR2BP41595 481 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 AP2S1P53680 142 aaPredicted RBP2.21□□□□□ -2.06
USP48-209ENST00000487880 PLTPP55058 493 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 TMBIM6P55061 237 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 DSTNP60981 165 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 ZNF846Q147U1 533 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 CAVIN4Q5BKX8 364 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 XKRXQ6PP77 449 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 PAGE2Q7Z2X7 111 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 COMTD1Q86VU5 262 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 CYP4Z2PQ8N1L4 340 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 PACRGLQ8N7B6 248 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 TRIML2Q8N7C3 387 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 UBL4BQ8N7F7 174 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 NDNFQ8TB73 568 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 UBA3Q8TBC4 463 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 FXYD5Q96DB9 178 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 OTUB2Q96DC9 234 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 CMTM5Q96DZ9 223 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 CENPNQ96H22 339 aaPredicted RBP2.21□□□□□ -2.06
USP48-209ENST00000487880 SMIM8Q96KF7 97 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 IGF2BP2-AS1Q96M15 143 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 SERPINI1Q99574 410 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 PSTPIP2Q9H939 334 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 ANKHQ9HCJ1 492 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 MRPL40Q9NQ50 206 aaKnown RBP2.21□□□□□ -2.06
USP48-209ENST00000487880 RBM22Q9NW64 420 aaKnown RBP eCLIP2.21□□□□□ -2.06
USP48-209ENST00000487880 TAC3Q9UHF0 121 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.21□□□□□ -2.06
USP48-209ENST00000487880 ATAD5Q96QE3 1844 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 LMO7Q8WWI1 1683 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 RTL9Q8NET4 1388 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 MYH1P12882 1939 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 MYH2Q9UKX2 1941 aa2.21□□□□□ -2.06
USP48-209ENST00000487880 TMEM131Q92545 1883 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 PCNX2A6NKB5 2137 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 IGLV10-54A0A075B6I4 117 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 A0A087X0T9 212 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 A0A1W2PPV4 95 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 ANKRD20A5PA0PJZ0 165 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 SMIM23A6NLE4 172 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 CLDN25C9JDP6 229 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 H3BSA7 217 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 PSMD12O00232 456 aaPredicted RBP2.2□□□□□ -2.06
USP48-209ENST00000487880 YKT6O15498 198 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 DHRS3O75911 302 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 IGHV3-53P01767 116 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 HMGN1P05114 100 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 CDK1P06493 297 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 RHOCP08134 193 aa2.2□□□□□ -2.06
USP48-209ENST00000487880 RPS17P08708 135 aaKnown RBP2.2□□□□□ -2.06
USP48-209ENST00000487880 FAM228BP0C875 321 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms