RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 NHLRC3Q5JS37 347 aa12.59□□□□□ -0.39
SRRT-212ENST00000487311 ATAD3CQ5T2N8 411 aa12.59□□□□□ -0.39
SRRT-212ENST00000487311 C5orf24Q7Z6I8 188 aa12.59□□□□□ -0.39
SRRT-212ENST00000487311 CT45A3Q8NHU0 189 aa12.59□□□□□ -0.39
SRRT-212ENST00000487311 PYDC1Q8WXC3 89 aa12.59□□□□□ -0.39
SRRT-212ENST00000487311 METTL9Q9H1A3 318 aa12.59□□□□□ -0.39
SRRT-212ENST00000487311 WSB1Q9Y6I7 421 aa12.59□□□□□ -0.39
SRRT-212ENST00000487311 EPPK1P58107 5090 aaKnown RBP12.58□□□□□ -0.4
SRRT-212ENST00000487311 G3V318 75 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
SRRT-212ENST00000487311 SLC2A2P11168 524 aaPredicted RBP12.58□□□□□ -0.4
SRRT-212ENST00000487311 SERPINA2P20848 420 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 VDAC1P21796 283 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 PPIFP30405 207 aaKnown RBP12.58□□□□□ -0.4
SRRT-212ENST00000487311 GBX2P52951 348 aaPredicted RBP12.58□□□□□ -0.4
SRRT-212ENST00000487311 GNB1P62873 340 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 ZNF497Q6ZNH5 498 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 SLC25A48Q6ZT89 311 aaKnown RBP12.58□□□□□ -0.4
SRRT-212ENST00000487311 ZNF491Q8N8L2 437 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 OR52I1Q8NGK6 324 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 OR1N2Q8NGR9 330 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 RHOXF1Q8NHV9 184 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 MUC7Q8TAX7 377 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 MRPL48Q96GC5 212 aaKnown RBP12.58□□□□□ -0.4
SRRT-212ENST00000487311 OR5B12Q96R08 314 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 IL36GQ9NZH8 169 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 SIRT4Q9Y6E7 314 aaPredicted RBP12.58□□□□□ -0.4
SRRT-212ENST00000487311 SMAD5-AS1Q9Y6J3 95 aa12.58□□□□□ -0.4
SRRT-212ENST00000487311 C12orf77C9JDV5 145 aa12.57□□□□□ -0.4
SRRT-212ENST00000487311 LY86O95711 162 aa12.57□□□□□ -0.4
SRRT-212ENST00000487311 CNTFRP26992 372 aa12.57□□□□□ -0.4
SRRT-212ENST00000487311 ZNF93P35789 620 aaPredicted RBP12.57□□□□□ -0.4
SRRT-212ENST00000487311 ZNF137PP52743 207 aa12.57□□□□□ -0.4
SRRT-212ENST00000487311 KLHL22Q53GT1 634 aa12.57□□□□□ -0.4
SRRT-212ENST00000487311 SYT6Q5T7P8 510 aaPredicted RBP12.57□□□□□ -0.4
SRRT-212ENST00000487311 OVCH2Q7RTZ1 564 aa12.57□□□□□ -0.4
SRRT-212ENST00000487311 OR8H1Q8NGG4 311 aa12.57□□□□□ -0.4
SRRT-212ENST00000487311 OR10V1Q8NGI7 309 aa12.57□□□□□ -0.4
SRRT-212ENST00000487311 CPNE2Q96FN4 548 aaPredicted RBP12.57□□□□□ -0.4
SRRT-212ENST00000487311 SORL1Q92673 2214 aa12.57□□□□□ -0.4
SRRT-212ENST00000487311 STAB2Q8WWQ8 2551 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 SNTNA6NMZ2 147 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 AIPO00170 330 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 FADS2O95864 444 aaKnown RBP12.56□□□□□ -0.4
SRRT-212ENST00000487311 CSTBP04080 98 aaKnown RBP12.56□□□□□ -0.4
SRRT-212ENST00000487311 LIMS3P0CW19 117 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 LIMS4P0CW20 117 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 MYF6P23409 242 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 IL3RAP26951 378 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 ALDH3A2P51648 485 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 ADARB1P78563 741 aaKnown RBP12.56□□□□□ -0.4
SRRT-212ENST00000487311 DDI2Q5TDH0 399 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 OR4K15Q8NH41 348 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 OR1L1Q8NH94 360 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 GPR148Q8TDV2 347 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 DCUN1D4Q92564 292 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 TMEM106AQ96A25 262 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 UBE2E2Q96LR5 201 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 RCHY1Q96PM5 261 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 TMEM138Q9NPI0 162 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 MRPS18AQ9NVS2 196 aaKnown RBP12.56□□□□□ -0.4
SRRT-212ENST00000487311 ZNF107Q9UII5 783 aaPredicted RBP12.56□□□□□ -0.4
SRRT-212ENST00000487311 GMPPBQ9Y5P6 360 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 DNAH1Q9P2D7 4330 aa12.56□□□□□ -0.4
SRRT-212ENST00000487311 MAGEA13PA6NCF6 341 aa12.55□□□□□ -0.4
SRRT-212ENST00000487311 H3BNX3 289 aa12.55□□□□□ -0.4
SRRT-212ENST00000487311 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
SRRT-212ENST00000487311 MRPL28Q13084 256 aaKnown RBP12.55□□□□□ -0.4
SRRT-212ENST00000487311 MPV17LQ2QL34 196 aa12.55□□□□□ -0.4
SRRT-212ENST00000487311 Q3ZCU0 254 aa12.55□□□□□ -0.4
SRRT-212ENST00000487311 SLC22A6Q4U2R8 563 aa12.55□□□□□ -0.4
SRRT-212ENST00000487311 PRR18Q8N4B5 295 aa12.55□□□□□ -0.4
SRRT-212ENST00000487311 OR13C5Q8NGS8 318 aa12.55□□□□□ -0.4
SRRT-212ENST00000487311 NEK7Q8TDX7 302 aa12.55□□□□□ -0.4
SRRT-212ENST00000487311 ALX4Q9H161 411 aaPredicted RBP12.55□□□□□ -0.4
SRRT-212ENST00000487311 ZNF580Q9UK33 172 aa12.55□□□□□ -0.4
SRRT-212ENST00000487311 ORC6Q9Y5N6 252 aa12.55□□□□□ -0.4
SRRT-212ENST00000487311 FAM90A10PA6NDY2 464 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 HBZP02008 142 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 RCC1P18754 421 aaPredicted RBP12.54□□□□□ -0.4
SRRT-212ENST00000487311 BDKRB2P30411 391 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 ETV1P50549 477 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 RAB9AP51151 201 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 INSL3P51460 131 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 RUNX1Q01196 453 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 ZNF616Q08AN1 781 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 RAB40BQ12829 278 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 LSAMPQ13449 338 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 OR2G6Q5TZ20 316 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 LINC00596Q86U02 117 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 ODF3L1Q8IXM7 274 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 CBR4Q8N4T8 237 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 APH1BQ8WW43 257 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 DLX4Q92988 240 aaPredicted RBP12.54□□□□□ -0.4
SRRT-212ENST00000487311 MYCBPQ99417 103 aaPredicted RBP12.54□□□□□ -0.4
SRRT-212ENST00000487311 GNG12Q9UBI6 72 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 TRAPPC2LQ9UL33 140 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 VSIG4Q9Y279 399 aa12.54□□□□□ -0.4
SRRT-212ENST00000487311 IGHV7-81A0A0B4J1V7 117 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 ATP6V0E1O15342 81 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms