RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 TEX36Q5VZQ5 186 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 CLEC18BQ6UXF7 455 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 KCTD9Q7L273 389 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 CMTM1Q8IZ96 169 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 MUC15Q8N387 334 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 OR5M8Q8NGP6 311 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 OR2T35Q8NGX2 323 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 ANGPTL6Q8NI99 470 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 SECTM1Q8WVN6 248 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 IL1F10Q8WWZ1 152 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 TMEM230Q96A57 120 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 GALMQ96C23 342 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 WDR89Q96FK6 387 aaPredicted RBP5.9□□□□□ -1.46
SF3A3-206ENST00000487062 SDSLQ96GA7 329 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 VRK1Q99986 396 aaPredicted RBP5.9□□□□□ -1.46
SF3A3-206ENST00000487062 TMEM204Q9BSN7 226 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 PDCD10Q9BUL8 212 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 SUCNR1Q9BXA5 334 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 CHIAQ9BZP6 476 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 SLC5A7Q9GZV3 580 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 FAM234AQ9H0X4 552 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 LIME1Q9H400 295 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 NCOR1P1Q9H4R4 102 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 ZNF665Q9H7R5 613 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 TAF9BQ9HBM6 251 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 COMMD9Q9P000 198 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 OPN4Q9UHM6 478 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 OR2W1Q9Y3N9 320 aa5.9□□□□□ -1.46
SF3A3-206ENST00000487062 ITPR1Q14643 2758 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 COL6A6A6NMZ7 2263 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 PPIAL4EA0A075B759 164 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 PIGBOS1A0A0B4J2F0 54 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 IGKV1-6A0A0C4DH72 117 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 B8ZZF3 427 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 PPIAL4DF5H284 164 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 TMEM178BH3BS89 294 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 GPR31O00270 319 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 ZNF737O75373 536 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 SIX6O95475 246 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 PPIAL4FP0DN26 164 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 GZMHP20718 246 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 S100A1P23297 94 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 LOXP28300 417 aaPredicted RBP5.89□□□□□ -1.47
SF3A3-206ENST00000487062 GLIPR1P48060 266 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 LUMP51884 338 aaPredicted RBP5.89□□□□□ -1.47
SF3A3-206ENST00000487062 NKX2-5P52952 324 aaPredicted RBP5.89□□□□□ -1.47
SF3A3-206ENST00000487062 RND3P61587 244 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 SUPT4H1P63272 117 aaKnown RBP5.89□□□□□ -1.47
SF3A3-206ENST00000487062 SRPXP78539 464 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 CYCSP99999 105 aaKnown RBP5.89□□□□□ -1.47
SF3A3-206ENST00000487062 FGL1Q08830 312 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 EDDM3AQ14507 147 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 HERPUD1Q15011 391 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 STUMQ69YW2 141 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 GSG1LQ6UXU4 331 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 ZNF788Q6ZQV5 615 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 H1FOOQ8IZA3 346 aaPredicted RBP5.89□□□□□ -1.47
SF3A3-206ENST00000487062 PRR18Q8N4B5 295 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 MRGPRDQ8TDS7 321 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 RTN4IP1Q8WWV3 396 aaPredicted RBP5.89□□□□□ -1.47
SF3A3-206ENST00000487062 GALNT14Q96FL9 552 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 COQ2Q96H96 371 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 WNT10AQ9GZT5 417 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 SHARPINQ9H0F6 387 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 RAB1BQ9H0U4 201 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 NAA60Q9H7X0 242 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 METTL8Q9H825 291 aaKnown RBP5.89□□□□□ -1.47
SF3A3-206ENST00000487062 RAB18Q9NP72 206 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 SLC2A9Q9NRM0 540 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 TMEM106BQ9NUM4 274 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 OR6C3Q9NZP0 311 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 PPIAL4AQ9Y536 164 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 RBM7Q9Y580 266 aaKnown RBP5.89□□□□□ -1.47
SF3A3-206ENST00000487062 SPTA1P02549 2419 aa5.89□□□□□ -1.47
SF3A3-206ENST00000487062 DIDO1Q9BTC0 2240 aaKnown RBP5.89□□□□□ -1.47
SF3A3-206ENST00000487062 PLCE1Q9P212 2302 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 DSCAMO60469 2012 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 LAMA5O15230 3695 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 TRAV39A0A0B4J263 110 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 IGHV1-69-2A0A0G2JMI3 117 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 ODAMA1E959 279 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 C5orf51A6NDU8 294 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 DBX1A6NMT0 343 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 FAM25EA8MYX2 175 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 C12orf77C9JDV5 145 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 SMLR1H3BR10 107 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 SIGLEC5O15389 551 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 NDUFA2O43678 99 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 B3GALNT1O75752 331 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 ZNF205O95201 554 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 GOSR1O95249 250 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 IFNA21P01568 189 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 HBZP02008 142 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 GYPAP02724 150 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 TFF1P04155 84 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 HEXAP06865 529 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 RPS2P15880 293 aaKnown RBP5.88□□□□□ -1.47
SF3A3-206ENST00000487062 C4BPBP20851 252 aa5.88□□□□□ -1.47
SF3A3-206ENST00000487062 CEACAM6P40199 344 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms