RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 HOXD3P31249 432 aaPredicted RBP19.37■□□□□ 0.69
LIME1-206ENST00000487026 VHLP40337 213 aa19.37■□□□□ 0.69
LIME1-206ENST00000487026 RAB12Q6IQ22 244 aa19.37■□□□□ 0.69
LIME1-206ENST00000487026 LAIR2Q6ISS4 152 aa19.37■□□□□ 0.69
LIME1-206ENST00000487026 C8orf86Q6ZUL3 223 aa19.37■□□□□ 0.69
LIME1-206ENST00000487026 OR2W3Q7Z3T1 314 aa19.37■□□□□ 0.69
LIME1-206ENST00000487026 ST6GALNAC6Q969X2 333 aa19.37■□□□□ 0.69
LIME1-206ENST00000487026 ETAA1Q9NY74 926 aa19.37■□□□□ 0.69
LIME1-206ENST00000487026 RCC2Q9P258 522 aaKnown RBP19.37■□□□□ 0.69
LIME1-206ENST00000487026 TRAPPC2LQ9UL33 140 aa19.37■□□□□ 0.69
LIME1-206ENST00000487026 GNAO1P09471 354 aa19.36■□□□□ 0.69
LIME1-206ENST00000487026 ZNF134P52741 427 aa19.36■□□□□ 0.69
LIME1-206ENST00000487026 AWAT2Q6E213 333 aa19.36■□□□□ 0.69
LIME1-206ENST00000487026 PRR18Q8N4B5 295 aa19.36■□□□□ 0.69
LIME1-206ENST00000487026 Q8N6K4 173 aa19.36■□□□□ 0.69
LIME1-206ENST00000487026 PACRGLQ8N7B6 248 aa19.36■□□□□ 0.69
LIME1-206ENST00000487026 OR10V1Q8NGI7 309 aa19.36■□□□□ 0.69
LIME1-206ENST00000487026 OR2T10Q8NGZ9 312 aa19.36■□□□□ 0.69
LIME1-206ENST00000487026 OR1L1Q8NH94 360 aa19.36■□□□□ 0.69
LIME1-206ENST00000487026 RTN4IP1Q8WWV3 396 aaPredicted RBP19.36■□□□□ 0.69
LIME1-206ENST00000487026 SELENOIQ9C0D9 397 aa19.36■□□□□ 0.69
LIME1-206ENST00000487026 PEX16Q9Y5Y5 336 aa19.36■□□□□ 0.69
LIME1-206ENST00000487026 WI2-2373I1.2A0A1W2PRP0 233 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 EFCAB10A6NFE3 127 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 NUDT19A8MXV4 375 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 CELP19835 753 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 THBS3P49746 956 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 C5orf24Q7Z6I8 188 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 FOXRED2Q8IWF2 684 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 IZUMO1Q8IYV9 350 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 STPG2Q8N412 459 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 C8orf31Q8N9H6 132 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 TMEM104Q8NE00 496 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 DERL3Q96Q80 235 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 SPACA1Q9HBV2 294 aa19.35■□□□□ 0.69
LIME1-206ENST00000487026 UBE2QL1A1L167 161 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 SPINT2O43291 252 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 CRTAPO75718 401 aaPredicted RBP19.34■□□□□ 0.69
LIME1-206ENST00000487026 DUS4LO95620 317 aaKnown RBP19.34■□□□□ 0.69
LIME1-206ENST00000487026 HBZP02008 142 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 RCC1P18754 421 aaPredicted RBP19.34■□□□□ 0.69
LIME1-206ENST00000487026 IL3RAP26951 378 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 SLC35B1P78383 322 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 RCN1Q15293 331 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 DEFB121Q5J5C9 76 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 TGIF2LXQ8IUE1 241 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 Q8N9W7 124 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 ZNF439Q8NDP4 499 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 OR51D1Q8NGF3 324 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 MRPS24Q96EL2 167 aaKnown RBP19.34■□□□□ 0.69
LIME1-206ENST00000487026 GNG12Q9UBI6 72 aa19.34■□□□□ 0.69
LIME1-206ENST00000487026 MGMTP16455 207 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 CD1BP29016 333 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 CAPGP40121 348 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 GPR12P47775 334 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 TAS2R43P59537 309 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 CT45A1Q5HYN5 189 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 SLC25A48Q6ZT89 311 aaKnown RBP19.33■□□□□ 0.68
LIME1-206ENST00000487026 AHSA2Q719I0 299 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 LYPD6Q86Y78 171 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 C8orf59Q8N0T1 100 aaPredicted RBP19.33■□□□□ 0.68
LIME1-206ENST00000487026 KLHL30-AS1Q8NEE0 82 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 BPIFB6Q8NFQ5 453 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 CT45A3Q8NHU0 189 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 DUX3Q96PT4 197 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 ABCG5Q9H222 651 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 C8orf4Q9NR00 106 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 PLSCR3Q9NRY6 295 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 ZFP57Q9NU63 452 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 PSORS1C1Q9UIG5 152 aa19.33■□□□□ 0.68
LIME1-206ENST00000487026 MOSP00540 346 aa19.32■□□□□ 0.68
LIME1-206ENST00000487026 C6orf183Q5T699 404 aa19.32■□□□□ 0.68
LIME1-206ENST00000487026 SIGIRRQ6IA17 410 aa19.32■□□□□ 0.68
LIME1-206ENST00000487026 LCNL1Q6ZST4 164 aa19.32■□□□□ 0.68
LIME1-206ENST00000487026 CDH26Q8IXH8 852 aa19.32■□□□□ 0.68
LIME1-206ENST00000487026 LIN7CQ9NUP9 197 aaKnown RBP19.32■□□□□ 0.68
LIME1-206ENST00000487026 CNOT2Q9NZN8 540 aaKnown RBP19.32■□□□□ 0.68
LIME1-206ENST00000487026 MYL12BO14950 172 aa19.31■□□□□ 0.68
LIME1-206ENST00000487026 FUT3P21217 361 aa19.31■□□□□ 0.68
LIME1-206ENST00000487026 F2RL1P55085 397 aa19.31■□□□□ 0.68
LIME1-206ENST00000487026 WNT4P56705 351 aa19.31■□□□□ 0.68
LIME1-206ENST00000487026 INSL4Q14641 139 aa19.31■□□□□ 0.68
LIME1-206ENST00000487026 GAPTQ8N292 157 aa19.31■□□□□ 0.68
LIME1-206ENST00000487026 COMMD1Q8N668 190 aa19.31■□□□□ 0.68
LIME1-206ENST00000487026 FAM46BQ96A09 425 aa19.31■□□□□ 0.68
LIME1-206ENST00000487026 Q96M66 194 aa19.31■□□□□ 0.68
LIME1-206ENST00000487026 S1PR3Q99500 378 aa19.31■□□□□ 0.68
LIME1-206ENST00000487026 AP4M1O00189 453 aa19.3■□□□□ 0.68
LIME1-206ENST00000487026 RPLP1P05386 114 aaKnown RBP19.3■□□□□ 0.68
LIME1-206ENST00000487026 MYCNOSP40205 109 aa19.3■□□□□ 0.68
LIME1-206ENST00000487026 EGFEM1PQ0D2K5 195 aa19.3■□□□□ 0.68
LIME1-206ENST00000487026 Q3ZCU0 254 aa19.3■□□□□ 0.68
LIME1-206ENST00000487026 ZNF695Q8IW36 515 aa19.3■□□□□ 0.68
LIME1-206ENST00000487026 NANOGP1Q8N7R0 232 aa19.3■□□□□ 0.68
LIME1-206ENST00000487026 TFAP2CQ92754 450 aa19.3■□□□□ 0.68
LIME1-206ENST00000487026 RASL11BQ9BPW5 248 aa19.3■□□□□ 0.68
LIME1-206ENST00000487026 TAF9BQ9HBM6 251 aa19.3■□□□□ 0.68
LIME1-206ENST00000487026 PLCXD1Q9NUJ7 323 aa19.3■□□□□ 0.68
LIME1-206ENST00000487026 SC5DO75845 299 aa19.29■□□□□ 0.68
LIME1-206ENST00000487026 PNLIPRP3Q17RR3 467 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms