RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 CMSS1Q9BQ75 279 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-219ENST00000486935 WDR12Q9GZL7 423 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-219ENST00000486935 FAM234AQ9H0X4 552 aa12.66□□□□□ -0.38
SEMA4D-219ENST00000486935 KIAA2026Q5HYC2 2103 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 MEIOCA2RUB1 952 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 FAM181BA6NEQ2 426 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 POM121CA8CG34 1229 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 MGST3O14880 152 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 CRYBA1P05813 215 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 MDKP21741 143 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 PTBP1P26599 531 aaKnown RBP eCLIP12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 PRSS3P35030 304 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 KCNJ3P48549 501 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 EDDM3BP56851 147 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 DGCR2P98153 550 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 AESQ08117 197 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 ZNF846Q147U1 533 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 KRBOX4Q5JUW0 171 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 TRAPPC6BQ86SZ2 158 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 TPRX1Q8N7U7 411 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 OR5D13Q8NGL4 314 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 H1FXQ92522 213 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 COQ2Q96H96 371 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 SRRQ9GZT4 340 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 ONECUT1Q9UBC0 465 aa12.65□□□□□ -0.38
SEMA4D-219ENST00000486935 TMEM30CPA0ZSE6 113 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 SSX5O60225 188 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 TPPPO94811 219 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 CSN2P05814 226 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 FCER2P06734 321 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 MELTFP08582 738 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 RSBN1Q5VWQ0 802 aaPredicted RBP12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 VMO1Q7Z5L0 202 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 LY6G5BQ8NDX9 201 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 OR4K15Q8NH41 348 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 CCDC107Q8WV48 283 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 C12orf4Q9NQ89 552 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 KIF25Q9UIL4 384 aa12.64□□□□□ -0.39
SEMA4D-219ENST00000486935 TRAV39A0A0B4J263 110 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 A0A0U1RQK1 487 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 MEX3AA1L020 520 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 GABARAPH6UMI1 98 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 J3QRK9 145 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 CTDSPLO15194 276 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 CA11O75493 328 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 LPLP06858 475 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 GLIPR1P48060 266 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 SLC35E4Q6ICL7 350 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 ZNF497Q6ZNH5 498 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 Q8N402 240 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 OR52I2Q8NH67 350 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 MRPL30Q8TCC3 161 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 FCAMRQ8WWV6 532 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 MAFIPQ8WZ33 124 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 CHIAQ9BZP6 476 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 SCPEP1Q9HB40 452 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 IFT46Q9NQC8 304 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 KPTNQ9Y664 436 aa12.63□□□□□ -0.39
SEMA4D-219ENST00000486935 MEIKINA0A087WXM9 373 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 FUOMA2VDF0 154 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 GPR37O15354 613 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 FCGR3AP08637 254 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 P2RX3P56373 397 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 MRPS10P82664 201 aaKnown RBP12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 PRB3Q04118 309 aaPredicted RBP12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 PRR31Q5SQ13 230 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 TMEM86BQ8N661 226 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 KIR3DL3Q8N743 410 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 GDPD1Q8N9F7 314 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 GPX8Q8TED1 209 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 SMIM4Q8WVI0 70 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 SSMEM1Q8WWF3 244 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 SDHCQ99643 169 aaPredicted RBP12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 DCTN5Q9BTE1 182 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 ZNF230Q9UIE0 474 aaPredicted RBP12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 TRAPPC2LQ9UL33 140 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 FAM96BQ9Y3D0 163 aa12.62□□□□□ -0.39
SEMA4D-219ENST00000486935 ODAMA1E959 279 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 SULT1C2O00338 296 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 GSTZ1O43708 216 aaPredicted RBP12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 NAPSAO96009 420 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 IGHV4-59P01825 116 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 MT-ND4P03905 459 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 GLP1RP43220 463 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 PPP5CP53041 499 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 RAG2P55895 527 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 DLX1P56177 255 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 Q6ZPA2 131 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 FAM185AQ8N0U4 392 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 GVQW1Q8N7I0 195 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 OR4F5Q8NH21 305 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 ST6GALNAC5Q9BVH7 336 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 RIMS4Q9H426 269 aaPredicted RBP12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 BEX1Q9HBH7 125 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 SIRT7Q9NRC8 400 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 C19orf12Q9NSK7 152 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 C1RLQ9NZP8 487 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 POMT1Q9Y6A1 747 aa12.61□□□□□ -0.39
SEMA4D-219ENST00000486935 A0A1W2PRD5 423 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms