RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PITX3O75364 302 aa10.61□□□□□ -0.71
HSPG2-211ENST00000486901 NGFP01138 241 aa10.61□□□□□ -0.71
HSPG2-211ENST00000486901 SUCLG1P53597 346 aaKnown RBP10.61□□□□□ -0.71
HSPG2-211ENST00000486901 PAX9P55771 341 aa10.61□□□□□ -0.71
HSPG2-211ENST00000486901 NXPH1P58417 271 aa10.61□□□□□ -0.71
HSPG2-211ENST00000486901 C16orf82Q7Z2V1 217 aa10.61□□□□□ -0.71
HSPG2-211ENST00000486901 ZNF664Q8N3J9 261 aa10.61□□□□□ -0.71
HSPG2-211ENST00000486901 SIGLEC12Q96PQ1 595 aa10.61□□□□□ -0.71
HSPG2-211ENST00000486901 C8orf33Q9H7E9 229 aaPredicted RBP10.61□□□□□ -0.71
HSPG2-211ENST00000486901 CLDN34H7C241 214 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 EREGO14944 169 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 RBMXL2O75526 392 aaKnown RBP10.6□□□□□ -0.71
HSPG2-211ENST00000486901 TUSC2O75896 110 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 CRYAAP02489 173 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 NR2C1P13056 603 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 PMELP40967 661 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 UBE2G2P60604 165 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 BATFQ16520 125 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 LURAP1Q96LR2 239 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 GPR87Q9BY21 358 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 CBLN4Q9NTU7 201 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 C5orf49A4QMS7 147 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 ZIC3O60481 467 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 GZMHP20718 246 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 SUMO3P55854 103 aaPredicted RBP10.6□□□□□ -0.71
HSPG2-211ENST00000486901 PMS2P11Q13670 270 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 TDHQ8IZJ6 230 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 CPEB3Q8NE35 698 aaKnown RBP10.6□□□□□ -0.71
HSPG2-211ENST00000486901 GTF3AQ92664 365 aaKnown RBP10.6□□□□□ -0.71
HSPG2-211ENST00000486901 Q9N2K0 584 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 MED12LQ86YW9 2145 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 ABCA4P78363 2273 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 NPIPB13A6NJU9 1138 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 NPIPB4C9JG80 1138 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 PTBP3O95758 552 aaKnown RBP10.6□□□□□ -0.71
HSPG2-211ENST00000486901 WNT5AP41221 380 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 ECI1P42126 302 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 TGFBR3Q03167 851 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 DAZAP2Q15038 168 aaPredicted RBP10.6□□□□□ -0.71
HSPG2-211ENST00000486901 CST9LP1Q5W188 147 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 MRPL41Q8IXM3 137 aaKnown RBP10.6□□□□□ -0.71
HSPG2-211ENST00000486901 LHX4Q969G2 390 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 SPSB1Q96BD6 273 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 HIST1H2AAQ96QV6 131 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 OPA3Q9H6K4 179 aa10.6□□□□□ -0.71
HSPG2-211ENST00000486901 LAMA5O15230 3695 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 ZNF732B4DXR9 585 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 SYNGR3O43761 229 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 AMBPP02760 352 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 OR4A8P0C604 315 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 DTYMKP23919 212 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 EXT1Q16394 746 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 SDSLQ96GA7 329 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 RCC1LQ96I51 464 aaKnown RBP10.59□□□□□ -0.71
HSPG2-211ENST00000486901 CDCA3Q99618 268 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-211ENST00000486901 FOXB1Q99853 325 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 SMG1Q96Q15 3661 aaKnown RBP10.59□□□□□ -0.71
HSPG2-211ENST00000486901 LRRC3CA6NJW4 275 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 PDGFBP01127 241 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-211ENST00000486901 CCL4P13236 92 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 OTX2P32243 289 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 CXCL12P48061 93 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 CARD18P57730 90 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 GNB2P62879 340 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 C1QL4Q86Z23 238 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 ZNF808Q8N4W9 903 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-211ENST00000486901 ATP5SQ99766 215 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 ANGPTL4Q9BY76 406 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 MSL2Q9HCI7 577 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 MRPS17Q9Y2R5 130 aaKnown RBP10.59□□□□□ -0.71
HSPG2-211ENST00000486901 ABCA1O95477 2261 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 LOC102723971A0A1B0GUV8 181 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 TP53I11O14683 189 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 PGLYRP1O75594 196 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-211ENST00000486901 IGLV3-1P01715 115 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 IGHV3-13P01766 116 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 IGHV3-7P01780 117 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 LMO1P25800 156 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 TAS2R30P59541 319 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 ZNF506Q5JVG8 444 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 OR4F5Q8NH21 305 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 PLPPR1Q8TBJ4 325 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 OIT3Q8WWZ8 545 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 OR4F4Q96R69 305 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 FGF23Q9GZV9 251 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-211ENST00000486901 WNT5BQ9H1J7 359 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 DECR2Q9NUI1 292 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 PSENENQ9NZ42 101 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 OR14J1Q9UGF5 321 aa10.59□□□□□ -0.71
HSPG2-211ENST00000486901 ARFGEF3Q5TH69 2177 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 SCGB1D1O95968 90 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 IFNA10P01566 189 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 HSPB1P04792 205 aaKnown RBP10.58□□□□□ -0.72
HSPG2-211ENST00000486901 GZMBP10144 247 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 BCL2P10415 239 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 MSX1P28360 303 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 LHFPL2Q6ZUX7 228 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 OR10V1Q8NGI7 309 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 OR51G1Q8NGK1 321 aa10.58□□□□□ -0.72
HSPG2-211ENST00000486901 ZNF552Q9H707 407 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms