RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 GABARAPL2P60520 117 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 DMTNQ08495 405 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 CST6Q15828 149 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 CENPWQ5EE01 88 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 C10orf91Q5T1B1 145 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 HENMT1Q5T8I9 393 aaKnown RBP2.22□□□□□ -2.05
SMC4-218ENST00000486711 HCP5Q6MZN7 132 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 NIPAL1Q6NVV3 410 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 OR5K1Q8NHB7 308 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 MUC7Q8TAX7 377 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 EBNA1BP2Q99848 306 aaKnown RBP2.22□□□□□ -2.05
SMC4-218ENST00000486711 SLC19A3Q9BZV2 496 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 CHST5Q9GZS9 411 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 ALX4Q9H161 411 aaPredicted RBP2.22□□□□□ -2.05
SMC4-218ENST00000486711 SLC23A2Q9UGH3 650 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.22□□□□□ -2.05
SMC4-218ENST00000486711 IGKV1D-37A0A075B6S9 117 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 A0A1B0GU33 70 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 E7EQL1 145 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 J3QLI3 93 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 TOX3O15405 576 aaPredicted RBP2.21□□□□□ -2.06
SMC4-218ENST00000486711 SOX14O95416 240 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 YEATS4O95619 227 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 LTAP01374 205 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 OCMP0CE72 109 aaPredicted RBP2.21□□□□□ -2.06
SMC4-218ENST00000486711 OR12D1P0DN82 309 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 CTSEP14091 401 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 GADD45AP24522 165 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 GABRA3P34903 492 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 SULT1A2P50226 295 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 TSPAN31Q12999 210 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 APOFQ13790 326 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 MAPK14Q16539 360 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 CLEC12BQ2HXU8 276 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 PDPK2PQ6A1A2 396 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 SPNS3Q6ZMD2 512 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 LRP11Q86VZ4 500 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 LYPD6Q86Y78 171 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 Q8NAQ8 132 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 OR7G1Q8NGA0 311 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 DCUN1D5Q9BTE7 237 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 NRBP2Q9NSY0 501 aa2.21□□□□□ -2.06
SMC4-218ENST00000486711 IGLV10-54A0A075B6I4 117 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 KLRC4-KLRK1H3BQV0 150 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 H3BSA7 217 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 DENRO43583 198 aaKnown RBP2.2□□□□□ -2.06
SMC4-218ENST00000486711 SLC25A20O43772 301 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 CRATP43155 626 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 GZMMP51124 257 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 MEF2BQ02080 365 aaPredicted RBP2.2□□□□□ -2.06
SMC4-218ENST00000486711 FAM45BPQ6NSW5 357 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 LFNGQ8NES3 379 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 TAMM41Q96BW9 452 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 OR8B2Q96RD0 313 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 METTL9Q9H1A3 318 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 CARHSP1Q9Y2V2 147 aaKnown RBP2.2□□□□□ -2.06
SMC4-218ENST00000486711 WASHC3Q9Y3C0 194 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 ARAP3Q8WWN8 1544 aa2.2□□□□□ -2.06
SMC4-218ENST00000486711 MYO15BQ96JP2 1530 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 DAPL1A0PJW8 107 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 LECT2O14960 151 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 ATP6V1G2O95670 118 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 CTSGP08311 255 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 LGALS3P17931 250 aaKnown RBP2.19□□□□□ -2.06
SMC4-218ENST00000486711 AKR1C2P52895 323 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 DNAL1Q4LDG9 190 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 TIMM23BQ5SRD1 257 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 NOXRED1Q6NXP6 359 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 EBLN2Q6P2I7 272 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 SMARCD3Q6STE5 483 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 VN1R4Q7Z5H5 301 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 OR8K1Q8NGG5 319 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 ZNRF2Q8NHG8 242 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 MFSD8Q8NHS3 518 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 RAD51AP1Q96B01 352 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 RBP7Q96R05 134 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 ZNF286AQ9HBT8 521 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 MRPL16Q9NX20 251 aaKnown RBP2.19□□□□□ -2.06
SMC4-218ENST00000486711 GLS2Q9UI32 602 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 SCML1Q9UN30 329 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 LINC00588Q9Y4M8 146 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 TMEM94Q12767 1356 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 VWA8A3KMH1 1905 aa2.19□□□□□ -2.06
SMC4-218ENST00000486711 M0QYV0 167 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 TP53I11O14683 189 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 CETN3O15182 167 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 ASS1P00966 412 aaKnown RBP2.18□□□□□ -2.06
SMC4-218ENST00000486711 ORM1P02763 201 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 ADORA1P30542 326 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 AGTR1P30556 359 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 MAP3K7CLP57077 242 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 SKP1P63208 163 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 C1DQ13901 141 aaKnown RBP2.18□□□□□ -2.06
SMC4-218ENST00000486711 PDK2Q15119 407 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 TCF24Q7RTU0 167 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 DOLPP1Q86YN1 238 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 BLIDQ8IZY5 108 aa2.18□□□□□ -2.06
SMC4-218ENST00000486711 C2orf73Q8N5S3 287 aaPredicted RBP2.18□□□□□ -2.06
SMC4-218ENST00000486711 OR52E4Q8NGH9 312 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms