RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 NPIPB11E5RHQ5 1161 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 ENSAO43768 121 aaKnown RBP10.48□□□□□ -0.73
HDAC6-229ENST00000486665 ORC5O43913 435 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 TGFAP01135 160 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 HBZP02008 142 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 LIPFP07098 398 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 NAT1P18440 290 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 OMGP23515 440 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 CBX5P45973 191 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 DLX1P56177 255 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 SRSF2Q01130 221 aaKnown RBP10.48□□□□□ -0.73
HDAC6-229ENST00000486665 PRB3Q04118 309 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-229ENST00000486665 PAX8Q06710 450 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 HMGN3Q15651 99 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 SRSF7Q16629 238 aaKnown RBP eCLIP10.48□□□□□ -0.731e-6■■■□□ 17.2
HDAC6-229ENST00000486665 UTF1Q5T230 341 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 C6orf183Q5T699 404 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 CYB5R2Q6BCY4 276 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 OR52W1Q6IF63 320 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 LYSMD2Q8IV50 215 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 PRR18Q8N4B5 295 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 SMIM4Q8WVI0 70 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 S100ZQ8WXG8 99 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 SNAPC3Q92966 411 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 TMEM186Q96B77 213 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 ZNF714Q96N38 554 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 LINC00574Q9H8X3 128 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 HIF1ANQ9NWT6 349 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 TAS2R3Q9NYW6 316 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 KCNIP1Q9NZI2 227 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 ONECUT1Q9UBC0 465 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 MTFP1Q9UDX5 166 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 OPN4Q9UHM6 478 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.48□□□□□ -0.734e-6■■□□□ 13.5
HDAC6-229ENST00000486665 TRAV20A0A0B4J274 112 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 IGKV1-6A0A0C4DH72 117 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 ZNF729A6NN14 1252 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-229ENST00000486665 RBBP9O75884 186 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 ZNF16P17020 682 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-229ENST00000486665 HLA-DRB3P79483 266 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 MRPS10P82664 201 aaKnown RBP10.47□□□□□ -0.73
HDAC6-229ENST00000486665 BAK1Q16611 211 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 LTC4SQ16873 150 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 CHRFAM7AQ494W8 412 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 PRAMEF5Q5TYX0 476 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 Q6ZS49 121 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 MOB1BQ7L9L4 216 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 Q8N402 240 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 GDPD1Q8N9F7 314 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 BEST4Q8NFU0 473 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 THAP7Q9BT49 309 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-229ENST00000486665 ZNF286AQ9HBT8 521 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 IFT46Q9NQC8 304 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 IDI2-AS1Q9NZ38 188 aa10.47□□□□□ -0.73
HDAC6-229ENST00000486665 RBMX2Q9Y388 322 aaKnown RBP10.47□□□□□ -0.73
HDAC6-229ENST00000486665 A0A1W2PPH5 198 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 J3QRK9 145 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 M0R1W7 72 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 F2RL2O00254 374 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 FABP7O15540 132 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 MMP9P14780 707 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 HLA-DMAP28067 261 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 PPP5CP53041 499 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 ZNF846Q147U1 533 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 HERPUD1Q15011 391 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 KRTAP24-1Q3LI83 254 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 IGSF11Q5DX21 431 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 DCAF12L2Q5VW00 463 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 TRAT1Q6PIZ9 186 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 BTNL3Q6UXE8 466 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 OR52L2PQ8NGH6 319 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 KIRREL1Q96J84 757 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 DMRTB1Q96MA1 342 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 SIRPDQ9H106 197 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 GAL3ST2Q9H3Q3 398 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 ANXA10Q9UJ72 324 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 MGAT4AQ9UM21 535 aa10.46□□□□□ -0.73
HDAC6-229ENST00000486665 DOCK11Q5JSL3 2073 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 IGHV3-43A0A0B4J1X8 118 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 SPINT2O43291 252 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 AVPP01185 164 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 IFNA2P01563 188 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 PMP2P02689 132 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 IGHV1-8P0DP01 117 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 IGHV3-43DP0DP04 118 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 RCVRNP35243 200 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 LOXL3P58215 753 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 FAHD2BQ6P2I3 314 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-229ENST00000486665 HEPN1Q6WQI6 88 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 ZNF782Q6ZMW2 699 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-229ENST00000486665 C1orf122Q6ZSJ8 110 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 ZNF554Q86TJ5 538 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 GLCCI1Q86VQ1 547 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 KIR3DL3Q8N743 410 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 OR4A4PQ8NGN8 299 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 IL1F10Q8WWZ1 152 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 TMEM158Q8WZ71 300 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 TRIM63Q969Q1 353 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 FAHD2AQ96GK7 314 aa10.45□□□□□ -0.74
HDAC6-229ENST00000486665 TBX15Q96SF7 602 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms