RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 C1orf123Q9NWV4 160 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 GLTPQ9NZD2 209 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 ADA2Q9NZK5 511 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 TMEM216Q9P0N5 145 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 ATP6V1HQ9UI12 483 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 LAMP5Q9UJQ1 280 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 PSG11Q9UQ72 335 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 SNX24Q9Y343 169 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 STARD10Q9Y365 291 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 UGT2A1Q9Y4X1 527 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 TSSC4Q9Y5U2 329 aaPredicted RBP2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 U3KQV3 271 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 MYCBP2O75592 4640 aa2.65□□□□□ -1.99
SMARCC1-207ENST00000485833 APOBP04114 4563 aaKnown RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 LOC100131303A0A0U1RQF7 123 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 F8WDY8 70 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 HMGN4O00479 90 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 AIM2O14862 343 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 RIPK2O43353 540 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 SMIM24O75264 130 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 ZNF324O75467 553 aaPredicted RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 DIRAS3O95661 229 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 PTBP3O95758 552 aaKnown RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 MBD3O95983 291 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 BGLAPP02818 100 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 SERPINE1P05121 402 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 PGA4P0DJD7 388 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 PGA3P0DJD8 388 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 KITLGP21583 273 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 FKBP2P26885 142 aaKnown RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 PRDX6P30041 224 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 APLNRP35414 380 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 CHI3L1P36222 383 aaPredicted RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 CEBPDP49716 269 aaPredicted RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 RAB25P57735 213 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 RPL23AP62750 156 aaKnown RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 EWSR1Q01844 656 aaKnown RBP eCLIP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 HSF2Q03933 536 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 UAP1Q16222 522 aaPredicted RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 MOGQ16653 247 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 IMPG1Q17R60 797 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 OR2T2Q6IF00 324 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 TMEM53Q6P2H8 277 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 METAP1DQ6UB28 335 aaPredicted RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 RNF165Q6ZSG1 346 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 OR2W3Q7Z3T1 314 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 FAM220AQ7Z4H9 259 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 FAM71E2Q8N5Q1 922 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 OR51G2Q8NGK0 314 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 KIR2DL5BQ8NHK3 375 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 SFXN5Q8TD22 340 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 AENQ8WTP8 325 aaKnown RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 PYROXD1Q8WU10 500 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 DNAJA4Q8WW22 397 aaPredicted RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 OR5P2Q8WZ92 322 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 CDKL2Q92772 493 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 NSMCE2Q96MF7 247 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 RTBDNQ9BSG5 229 aaPredicted RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 C1orf50Q9BV19 199 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 OR2H1Q9GZK4 316 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 PPDPFQ9H3Y8 114 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 PAK1IP1Q9NWT1 392 aaPredicted RBP2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 PTTG3PQ9NZH4 202 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 P2RX2Q9UBL9 471 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 STK38LQ9Y2H1 464 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 FIS1Q9Y3D6 152 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 KPTNQ9Y664 436 aa2.64□□□□□ -1.99
SMARCC1-207ENST00000485833 LOC102725191A0A1B0GVB3 256 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 A0A1B0GWA3 101 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 ZNF705EA8MWA4 302 aaPredicted RBP2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 LGALS8O00214 317 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 PGRMC1O00264 195 aaKnown RBP2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 PLPP3O14495 311 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 LSM1O15116 133 aaKnown RBP2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 RAMP3O60896 148 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 BRI3O95415 125 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 SNRPAP09012 282 aaKnown RBP2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 RBP1P09455 135 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 LINC00032P0C843 101 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 GSTT2P0CG29 244 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 GSTT2BP0CG30 244 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 NQO1P15559 274 aaKnown RBP2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 COX7A1P24310 79 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 CD24P25063 80 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 GDI2P50395 445 aaKnown RBP2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 SERPINB8P50452 374 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 UBE2E1P51965 193 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 ST3GAL3Q11203 375 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 PDZK1IP1Q13113 114 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 NAB1Q13506 487 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 ENDOGQ14249 297 aaKnown RBP2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 ZNF181Q2M3W8 571 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 SLC36A2Q495M3 483 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 HHATQ5VTY9 493 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 OR4F3Q6IEY1 312 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 C1orf94Q6P1W5 598 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 UNQ9370/PRO34162Q6UXP9 181 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 SLC35D2Q76EJ3 337 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 WDR86Q86TI4 376 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 RIMKLAQ8IXN7 391 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms