RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 KCNJ3P48549 501 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 RBM11P57052 281 aaKnown RBP9.46□□□□□ -0.9
SSR4-210ENST00000485612 CFHR3Q02985 330 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 GPR50Q13585 617 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 PNLIPRP3Q17RR3 467 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 SLC16A12Q6ZSM3 486 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 ZNF429Q86V71 674 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 OR10A7Q8NGE5 316 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 OR52I1Q8NGK6 324 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 RTN4IP1Q8WWV3 396 aaPredicted RBP9.46□□□□□ -0.9
SSR4-210ENST00000485612 LINC00476Q8WZB0 136 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 ST6GALNAC6Q969X2 333 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 LIN7CQ9NUP9 197 aaKnown RBP9.46□□□□□ -0.9
SSR4-210ENST00000485612 FAM118AQ9NWS6 357 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 GFOD1Q9NXC2 390 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 ING4Q9UNL4 249 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 ST3GAL6Q9Y274 331 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 ORC6Q9Y5N6 252 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 GMPPBQ9Y5P6 360 aa9.46□□□□□ -0.9
SSR4-210ENST00000485612 TMEM30CPA0ZSE6 113 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 IFNA6P05013 189 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 RPSAP08865 295 aaKnown RBP9.45□□□□□ -0.9
SSR4-210ENST00000485612 LIMS3P0CW19 117 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 LIMS4P0CW20 117 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 SERPINA2P20848 420 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 ALDH3A2P51648 485 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 F2RL1P55085 397 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 CXorf66Q5JRM2 361 aaPredicted RBP9.45□□□□□ -0.9
SSR4-210ENST00000485612 CBR4Q8N4T8 237 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 LINC00311Q8N616 119 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 ZNF439Q8NDP4 499 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 OR13C5Q8NGS8 318 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 OR2T10Q8NGZ9 312 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 GATAD1Q8WUU5 269 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 MRPL48Q96GC5 212 aaKnown RBP9.45□□□□□ -0.9
SSR4-210ENST00000485612 S1PR3Q99500 378 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 SPATA25Q9BR10 227 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 FAM53CQ9NYF3 392 aa9.45□□□□□ -0.9
SSR4-210ENST00000485612 MAGEA13PA6NCF6 341 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 MAGEB3O15480 346 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 CIB2O75838 187 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 LY6G6CO95867 125 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 VHLP40337 213 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 GBX2P52951 348 aaPredicted RBP9.44□□□□□ -0.9
SSR4-210ENST00000485612 FOXE3Q13461 319 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 FHL3Q13643 280 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 SRSF7Q16629 238 aaKnown RBP eCLIP9.44□□□□□ -0.9
SSR4-210ENST00000485612 NHLRC3Q5JS37 347 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 ATAD3CQ5T2N8 411 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 DDI2Q5TDH0 399 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 ZNF497Q6ZNH5 498 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 C5orf24Q7Z6I8 188 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 FAM71E2Q8N5Q1 922 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 OR11H1Q8NG94 326 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 OR10V1Q8NGI7 309 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 OR52M1Q8NGK5 317 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 OR52N1Q8NH53 320 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 RHOXF1Q8NHV9 184 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 APH1BQ8WW43 257 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 TMEM106AQ96A25 262 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 CPNE2Q96FN4 548 aaPredicted RBP9.44□□□□□ -0.9
SSR4-210ENST00000485612 IFT22Q9H7X7 185 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 IL36GQ9NZH8 169 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 KMT2AQ03164 3969 aa9.44□□□□□ -0.9
SSR4-210ENST00000485612 SNTNA6NMZ2 147 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 C12orf77C9JDV5 145 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 MPZL2O60487 215 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 FADS2O95864 444 aaKnown RBP9.43□□□□□ -0.9
SSR4-210ENST00000485612 MOSP00540 346 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 MT-ND4P03905 459 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 IGHV4-30-4P0DP06 118 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 CD1BP29016 333 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 RASSF2P50749 326 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 ZNF134P52741 427 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 SMN1Q16637 294 aaKnown RBP9.43□□□□□ -0.9
SSR4-210ENST00000485612 OR2G6Q5TZ20 316 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 ASPHD1Q5U4P2 390 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 NEK7Q8TDX7 302 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 SLC29A1Q99808 456 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 RASL11BQ9BPW5 248 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 METTL9Q9H1A3 318 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 GNB4Q9HAV0 340 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 ISYNA1Q9NPH2 558 aa9.43□□□□□ -0.9
SSR4-210ENST00000485612 AIPO00170 330 aa9.42□□□□□ -0.9
SSR4-210ENST00000485612 LALBAP00709 142 aa9.42□□□□□ -0.9
SSR4-210ENST00000485612 IGHG4P01861 327 aa9.42□□□□□ -0.9
SSR4-210ENST00000485612 CSTBP04080 98 aaKnown RBP9.42□□□□□ -0.9
SSR4-210ENST00000485612 ELANEP08246 267 aa9.42□□□□□ -0.9
SSR4-210ENST00000485612 SLC2A2P11168 524 aaPredicted RBP9.42□□□□□ -0.9
SSR4-210ENST00000485612 GZMHP20718 246 aa9.42□□□□□ -0.9
SSR4-210ENST00000485612 CNTFRP26992 372 aa9.42□□□□□ -0.9
SSR4-210ENST00000485612 PSMB8P28062 276 aa9.42□□□□□ -0.9
SSR4-210ENST00000485612 ZNF93P35789 620 aaPredicted RBP9.42□□□□□ -0.9
SSR4-210ENST00000485612 ETV1P50549 477 aa9.42□□□□□ -0.9
SSR4-210ENST00000485612 RAB40BQ12829 278 aa9.42□□□□□ -0.9
SSR4-210ENST00000485612 MRPL28Q13084 256 aaKnown RBP9.42□□□□□ -0.9
SSR4-210ENST00000485612 SLC22A6Q4U2R8 563 aa9.42□□□□□ -0.9
SSR4-210ENST00000485612 CT45A1Q5HYN5 189 aa9.42□□□□□ -0.9
SSR4-210ENST00000485612 SLC25A48Q6ZT89 311 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms