RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 DEFB135Q30KP9 77 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 IFI44LQ53G44 452 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 KRBOX4Q5JUW0 171 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 CLVS2Q5SYC1 327 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 ERICH5Q6P6B1 374 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 SLC25A26Q70HW3 274 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 TRPM8Q7Z2W7 1104 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 CYP4Z1Q86W10 505 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 CCDC28AQ8IWP9 274 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 YIPF7Q8N8F6 280 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 TMEM104Q8NE00 496 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 RFESDQ8TAC1 157 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 OR51E1Q8TCB6 317 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 THEM6Q8WUY1 208 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 INTS14Q96SY0 518 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 MBOAT4Q96T53 435 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 ROPN1BQ9BZX4 212 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-210ENST00000485247 ROPN1Q9HAT0 212 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-210ENST00000485247 RANGRFQ9HD47 186 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-210ENST00000485247 GPR84Q9NQS5 396 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 RBFOX1Q9NWB1 397 aaKnown RBP3.95□□□□□ -1.78
PTPN4-210ENST00000485247 TAS2R1Q9NYW7 299 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 IDI2-AS1Q9NZ38 188 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 APLNQ9ULZ1 77 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 FOXA2Q9Y261 457 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-210ENST00000485247 IGKV1-27A0A075B6S5 117 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 A0A0U1RQV5 110 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 TMEM269A0A1B0GVZ9 245 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 CXCR6O00574 342 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 OR2H2O95918 312 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 LYNP07948 512 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 CGB3P0DN86 165 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 CGB7P0DN87 165 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 ATP6V1B1P15313 513 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 PRKACAP17612 351 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 BCL3P20749 454 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 HTR1FP30939 366 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 GLP1RP43220 463 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 TCTAP57738 103 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 CDC42P60953 191 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 SCN1BQ07699 218 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 APOFQ13790 326 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 CYLC2Q14093 348 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-210ENST00000485247 CRMP1Q14194 572 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 ATXN7L3Q14CW9 347 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-210ENST00000485247 ZNF146Q15072 292 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 LRRC36Q1X8D7 754 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 TMEM42Q69YG0 159 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 LAX1Q8IWV1 398 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 ENTHD1Q8IYW4 607 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 RDH10Q8IZV5 341 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 FAM58AQ8N1B3 248 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 C11orf45Q8TAV5 145 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 RTN4IP1Q8WWV3 396 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-210ENST00000485247 COQ2Q96H96 371 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 C16orf45Q96MC5 204 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-210ENST00000485247 SPACA5Q96QH8 159 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 TEAD3Q99594 435 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 SH3GL1Q99961 368 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 OSBPL10Q9BXB5 764 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 ANKRD60Q9BZ19 345 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 SLC25A32Q9H2D1 315 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 PPIL3Q9H2H8 161 aaKnown RBP3.94□□□□□ -1.78
PTPN4-210ENST00000485247 EGLN3Q9H6Z9 239 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 SEBOXQ9HB31 216 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-210ENST00000485247 CALYQ9NYX4 217 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 ERGIC3Q9Y282 383 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 GSTK1Q9Y2Q3 226 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 ENPP4Q9Y6X5 453 aa3.94□□□□□ -1.78
PTPN4-210ENST00000485247 EPM2AB3EWF7 344 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 SH2D1BO14796 132 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 RGS16O15492 202 aaPredicted RBP3.93□□□□□ -1.78
PTPN4-210ENST00000485247 ENTPD6O75354 484 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 DHRS3O75911 302 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 DIRAS1O95057 198 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 TNFRSF6BO95407 300 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 IL1AP01583 271 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 HLA-DRB1P01911 266 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 TRGV3P03979 118 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 CSTBP04080 98 aaKnown RBP3.93□□□□□ -1.78
PTPN4-210ENST00000485247 ZNF44P15621 663 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 CTRB1P17538 263 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 BLVRAP53004 296 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 NDPQ00604 133 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 ACTBL2Q562R1 376 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 SPIN3Q5JUX0 258 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 LINC01590Q5TEZ4 76 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 CTRB2Q6GPI1 263 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 LIN54Q6MZP7 749 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 SHFQ7M4L6 423 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 ZNF565Q8N9K5 539 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 OR2T12Q8NG77 320 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 OR8J3Q8NGG0 315 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 OR13A1Q8NGR1 328 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 OR2K2Q8NGT1 345 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 ABHD5Q8WTS1 349 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 OTULINQ96BN8 352 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 RCN3Q96D15 328 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 CCDC28BQ9BUN5 200 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 BARHL1Q9BZE3 327 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms