RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, human

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR3-210	ENST00000484596	APCS	P02743	223 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	RPS17	P08708	135 aa	Known RBP	4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	MMP7	P09237	267 aa	Predicted RBP	4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	OR56A5	P0C7T3	313 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	SMIM10L2A	P0DMW4	78 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	SMIM10L2B	P0DMW5	78 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	RPS9	P46781	194 aa	Known RBP	4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	GTF2A1	P52655	376 aa	Predicted RBP	4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	CEBPG	P53567	150 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	AKAP13	Q12802	2813 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	TMEM249	Q2WGJ8	235 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	KDM4D	Q6B0I6	523 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	KIAA1549L	Q6ZVL6	1849 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	LGI3	Q8N145	548 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	C2orf73	Q8N5S3	287 aa	Predicted RBP	4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	CYB561D1	Q8N8Q1	229 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	OR4K5	Q8NGD3	323 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	CHD6	Q8TD26	2715 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	DMXL2	Q8TDJ6	3036 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	DOK4	Q8TEW6	326 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	DCAKD	Q8WVC6	231 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	TMEM159	Q96B96	161 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	DGCR14	Q96DF8	476 aa	Known RBP	4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	ZFP3	Q96NJ6	502 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	OR4K3	Q96R72	315 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	NDFIP1	Q9BT67	221 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	WFDC1	Q9HC57	220 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	ACOT13	Q9NPJ3	140 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	TAS2R9	Q9NYW1	312 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	FBXL3	Q9UKT7	428 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	USP24	Q9UPU5	2620 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	EPG5	Q9HCE0	2579 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	KIF26A	Q9ULI4	1882 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	MYO16	Q9Y6X6	1858 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	BPTF	Q12830	3046 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	ITPR1	Q14643	2758 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	TMEM223	A0PJW6	202 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	CLDN34	H7C241	214 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596		J3QT63	122 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	BPY2	O14599	106 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	COX5B	P10606	129 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	MAGEA2	P43356	314 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	OR12D2	P58182	307 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	ERVS71-1	P61550	626 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	EBI3	Q14213	229 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	IMPG1	Q17R60	797 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	RESP18	Q5W5W9	173 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	SLC13A5	Q86YT5	568 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	ATPAF2	Q8N5M1	289 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	TBC1D19	Q8N5T2	526 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	CPNE4	Q96A23	557 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	SMARCD1	Q96GM5	515 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	RBBP8	Q99708	897 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	PDCD1LG2	Q9BQ51	273 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	RSG1	Q9BU20	258 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	ZNF426	Q9BUY5	554 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	PLEKHJ1	Q9NW61	149 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	TFR2	Q9UP52	801 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	SLC7A11	Q9UPY5	501 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	TMEM14A	Q9Y6G1	99 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	NCOR2	Q9Y618	2525 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	EML5	Q05BV3	1969 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	OBSL1	O75147	1896 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	CHD8	Q9HCK8	2581 aa		4.07	□□□□□ -1.76
UBR3-210	ENST00000484596	DENND4C	Q5VZ89	1909 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	TRAV8-6	A0A0B4J262	113 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	SLC5A10	A0PJK1	596 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	TMEM114	B3SHH9	223 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	LOC730098	B7Z3J9	87 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	FOXH1	O75593	365 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	MT-ND4	P03905	459 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	ZNF688	P0C7X2	276 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	MSN	P26038	577 aa	Known RBP	4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	PAX6	P26367	422 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	ERF	P50548	548 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	TAS2R31	P59538	309 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	STX4	Q12846	297 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	OR4D1	Q15615	310 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	PRSS8	Q16651	343 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	COX19	Q49B96	90 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	SAXO2	Q658L1	398 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	ZFP2	Q6ZN57	461 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596		Q6ZSR6	202 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	CYP4Z2P	Q8N1L4	340 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	NT5C	Q8TCD5	201 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	SNF8	Q96H20	258 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	NARS2	Q96I59	477 aa	Known RBP	4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	ZNF355P	Q9NSJ1	428 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	NLE1	Q9NVX2	485 aa	Predicted RBP	4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	RHBDL2	Q9NX52	303 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	CYB5R1	Q9UHQ9	305 aa		4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	MAP1B	P46821	2468 aa	Known RBP	4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	EP300	Q09472	2414 aa	Predicted RBP	4.06	□□□□□ -1.76
UBR3-210	ENST00000484596	TSC2	P49815	1807 aa		4.05	□□□□□ -1.76
UBR3-210	ENST00000484596		A0A1W2PQL4	384 aa	Predicted RBP	4.05	□□□□□ -1.76
UBR3-210	ENST00000484596	C5orf63	A6NC05	138 aa		4.05	□□□□□ -1.76
UBR3-210	ENST00000484596	TMEM238	C9JI98	176 aa		4.05	□□□□□ -1.76
UBR3-210	ENST00000484596		H0YJW9	148 aa		4.05	□□□□□ -1.76
UBR3-210	ENST00000484596		M0R1X1	148 aa		4.05	□□□□□ -1.76
UBR3-210	ENST00000484596	EIF1B	O60739	113 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms