RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 A0A1W2PP64 1363 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 SCN4AP35499 1836 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 C9orf84Q5VXU9 1444 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 RPRD2Q5VT52 1461 aaKnown RBP2.67□□□□□ -1.98
VPS13A-211ENST00000484581 IGHV3OR16-8A0A075B7F1 116 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 TEX50A0A1B0GTY4 177 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 LEUTXA8MZ59 168 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 F5H5P2 479 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 H3BSA7 217 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 K7ERS5 55 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 TGOLN2O43493 480 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 WISP3O95389 354 aaPredicted RBP2.67□□□□□ -1.98
VPS13A-211ENST00000484581 HBZP02008 142 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 IGLV7-43P04211 117 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 PSMA1P25786 263 aaKnown RBP2.67□□□□□ -1.98
VPS13A-211ENST00000484581 KRTAP10-1P60331 282 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 SPATA31B1PQ5VZV4 182 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 SLC25A34Q6PIV7 304 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 CD200R1LQ6Q8B3 271 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 CYHR1Q6ZMK1 362 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 ZFP82Q8N141 532 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 OR51H1Q8NH63 302 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 ERMNQ8TAM6 284 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 HAVCR2Q8TDQ0 301 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 SLC37A2Q8TED4 501 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 RAB8BQ92930 207 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 TESCQ96BS2 214 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 PYURFQ96I23 114 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 MRPS26Q9BYN8 205 aaKnown RBP2.67□□□□□ -1.98
VPS13A-211ENST00000484581 DERL2Q9GZP9 239 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 OR51B6Q9H340 312 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 LRRC19Q9H756 370 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 LINC00527Q9UJ94 153 aa2.67□□□□□ -1.98
VPS13A-211ENST00000484581 IGKV2-28A0A075B6P5 120 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 TMEM150BA6NC51 233 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 ZNF98A6NK75 572 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 COLCA2A8K830 154 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 GOLGA6L19H0YKK7 550 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 M0R036 132 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 LTAP01374 205 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 IGKV2D-28P01615 120 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 CEBPGP53567 150 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 AP2S1P53680 142 aaPredicted RBP2.66□□□□□ -1.98
VPS13A-211ENST00000484581 FADDQ13158 208 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 Q6ZRU5 148 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 TCF23Q7RTU1 214 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 ZBTB8OSQ8IWT0 167 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 ZNRF2Q8NHG8 242 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 MAL2Q969L2 176 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 GALMQ96C23 342 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 LINC00477Q96M19 166 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 LINC00167Q96N53 147 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 RTBDNQ9BSG5 229 aaPredicted RBP2.66□□□□□ -1.98
VPS13A-211ENST00000484581 SHANK2-AS3Q9BTD1 123 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 DNMT1P26358 1616 aaKnown RBP2.66□□□□□ -1.98
VPS13A-211ENST00000484581 ARAP3Q8WWN8 1544 aa2.66□□□□□ -1.98
VPS13A-211ENST00000484581 SLIT3O75094 1523 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 IGHV3OR15-7A0A075B7D8 119 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 ARGFXA6NJG6 315 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 C16orf90A8MZG2 172 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 ACOX3O15254 700 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 DCTN3O75935 186 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 HLA-DRAP01903 254 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 CALB1P05937 261 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 GABRA1P14867 456 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 ZNF7P17097 686 aaPredicted RBP2.65□□□□□ -1.99
VPS13A-211ENST00000484581 HOXA6P31267 233 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 CDKN2CP42773 168 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 HAAOP46952 286 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 PSMB3P49720 205 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 SULT1A2P50226 295 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 FMODQ06828 376 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 PPP1R1AQ13522 171 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 ZCWPW2Q504Y3 356 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 TRMT12Q53H54 448 aaKnown RBP2.65□□□□□ -1.99
VPS13A-211ENST00000484581 HES3Q5TGS1 186 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 NEGR1Q7Z3B1 354 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 DOLPP1Q86YN1 238 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 FER1L6-AS1Q8NA97 138 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 KCTD4Q8WVF5 259 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 APOBEC3DQ96AK3 386 aaPredicted RBP2.65□□□□□ -1.99
VPS13A-211ENST00000484581 PPP1R14BQ96C90 147 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 CMBLQ96DG6 245 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 OR7D2Q96RA2 312 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 TRIB3Q96RU7 358 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 TIPINQ9BVW5 301 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 GTSF1LQ9H1H1 148 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 ZNF492Q9P255 531 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 GUCA1BQ9UMX6 200 aa2.65□□□□□ -1.99
VPS13A-211ENST00000484581 MYO5BQ9ULV0 1848 aa2.64□□□□□ -1.99
VPS13A-211ENST00000484581 OR5H14A6NHG9 310 aa2.64□□□□□ -1.99
VPS13A-211ENST00000484581 TMEM210A6NLX4 147 aa2.64□□□□□ -1.99
VPS13A-211ENST00000484581 A8MUU9 505 aa2.64□□□□□ -1.99
VPS13A-211ENST00000484581 COPEO14579 308 aa2.64□□□□□ -1.99
VPS13A-211ENST00000484581 ATP5G1P05496 136 aa2.64□□□□□ -1.99
VPS13A-211ENST00000484581 FBP1P09467 338 aa2.64□□□□□ -1.99
VPS13A-211ENST00000484581 RPS12P25398 132 aaKnown RBP2.64□□□□□ -1.99
VPS13A-211ENST00000484581 S100A2P29034 98 aa2.64□□□□□ -1.99
VPS13A-211ENST00000484581 RPL12P30050 165 aaKnown RBP2.64□□□□□ -1.99
VPS13A-211ENST00000484581 EVI2BP34910 448 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms