RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SLC31A2O15432 143 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 ORC5O43913 435 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 PDCD6O75340 191 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 PEX14O75381 377 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 SNRNP70P08621 437 aaKnown RBP9.82□□□□□ -0.84
MSH5-216ENST00000484309 FAM90A15PP0C7V4 464 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 FAM90A13PP0C7W8 464 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 FAM90A14PP0C7W9 464 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 FAM90A24PP0C7X0 464 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 UBBP0CG47 229 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 CALRP27797 417 aaKnown RBP9.82□□□□□ -0.84
MSH5-216ENST00000484309 VDAC2P45880 294 aaPredicted RBP9.82□□□□□ -0.84
MSH5-216ENST00000484309 REG1BP48304 166 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 RPS27AP62979 156 aaKnown RBP9.82□□□□□ -0.84
MSH5-216ENST00000484309 MADCAM1Q13477 382 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 SSX1Q16384 188 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 CCDC144NLQ6NUI1 221 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 ZNF367Q7RTV3 350 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 DRAM1Q8N682 238 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 OR10A7Q8NGE5 316 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 FAM110DQ8TAY7 271 aaPredicted RBP9.82□□□□□ -0.84
MSH5-216ENST00000484309 SULT4A1Q9BR01 284 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 ACOT13Q9NPJ3 140 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 GHRLQ9UBU3 117 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 PLXNB1O43157 2135 aa9.82□□□□□ -0.84
MSH5-216ENST00000484309 IGHV3-72A0A0B4J1Y9 119 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 OOSP1A8MZH6 123 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 HSD17B6O14756 317 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 SLC22A1O15245 554 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 SPINT2O43291 252 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 OR2F2O95006 317 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 HBZP02008 142 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 CD28P10747 220 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 CHATP28329 748 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 CLDN12P56749 244 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 LOXL3P58215 753 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 HES1Q14469 280 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 TRAM1Q15629 374 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 ABCA11PQ4W5N1 156 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 C9orf152Q5JTZ5 239 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 C6orf183Q5T699 404 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 C11orf88Q6PI97 169 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 C6orf201Q7Z4U5 140 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 Q8N2B8 174 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 OR6M1Q8NGM8 313 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 MRPL30Q8TCC3 161 aaKnown RBP9.81□□□□□ -0.84
MSH5-216ENST00000484309 CFHR4Q92496 578 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 RBMXL1Q96E39 390 aaKnown RBP9.81□□□□□ -0.84
MSH5-216ENST00000484309 NEDD4LQ96PU5 975 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 FAAP24Q9BTP7 215 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 LIN7BQ9HAP6 207 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 GNG12Q9UBI6 72 aa9.81□□□□□ -0.84
MSH5-216ENST00000484309 NOTCH1P46531 2555 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 A0A0A6YYD4 124 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 TMEM14DPA8MWL7 114 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 H3BUI4 141 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 FBXO24O75426 580 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 ARL6IP5O75915 188 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 BPNT1O95861 308 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 LPLP06858 475 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 CSF1P09603 554 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 PSMA1P25786 263 aaKnown RBP9.8□□□□□ -0.84
MSH5-216ENST00000484309 GABARAPL2P60520 117 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 QRFPP83859 136 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 EMX1Q04741 257 aaPredicted RBP9.8□□□□□ -0.84
MSH5-216ENST00000484309 HNF4GQ14541 408 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 GNMTQ14749 295 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 RAB11BQ15907 218 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 C2orf68Q2NKX9 166 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 NSUN5P1Q3KNT7 163 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 HES5Q5TA89 166 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 C16orf82Q7Z2V1 217 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 MOB3BQ86TA1 216 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 GAPTQ8N292 157 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 OR52M1Q8NGK5 317 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 KCNG3Q8TAE7 436 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 AKR1E2Q96JD6 320 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 RBM14Q96PK6 669 aaKnown RBP9.8□□□□□ -0.84
MSH5-216ENST00000484309 MMP27Q9H306 513 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 TAF9BQ9HBM6 251 aa9.8□□□□□ -0.84
MSH5-216ENST00000484309 IGHV1-3A0A0C4DH29 117 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 CCRL2O00421 344 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 SLC17A2O00624 439 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 SOCS1O15524 211 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 CA11O75493 328 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 IGKV1D-33P01593 117 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 IGKV1-33P01594 117 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 AMY1AP04745 511 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 AMY2AP04746 511 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 GLAP06280 429 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 ARSBP15848 533 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 TMEM11P17152 192 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 BLVRBP30043 206 aaPredicted RBP9.79□□□□□ -0.84
MSH5-216ENST00000484309 RAB7AP51149 207 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 SLC16A12Q6ZSM3 486 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 DTX3Q8N9I9 347 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 ZNF439Q8NDP4 499 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 OR51D1Q8NGF3 324 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 OR52L2PQ8NGH6 319 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 SETD6Q8TBK2 473 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms