RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 GPR137BO60478 399 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 NDUFA7O95182 113 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 TMEM50BP56557 158 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 LOXL3P58215 753 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 LIAT1Q6ZQX7 453 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 MOB1BQ7L9L4 216 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 LINC00311Q8N616 119 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 OR13F1Q8NGS4 319 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 OR4K15Q8NH41 348 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 PIFOQ8TCI5 191 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 CCDC107Q8WV48 283 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 CYYR1Q96J86 154 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 SSX3Q99909 188 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 PLEKHJ1Q9NW61 149 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 GFOD1Q9NXC2 390 aa12.84□□□□□ -0.35
UPF3A-208ENST00000484246 AMMECR1Q9Y4X0 333 aaPredicted RBP12.84□□□□□ -0.35
UPF3A-208ENST00000484246 FAM181BA6NEQ2 426 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 LEUTXA8MZ59 168 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 BUB1B-PAK6H3BSN5 160 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 J3QR06 171 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 RAB27BO00194 218 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 TOR1AO14656 332 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 SPINT2O43291 252 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 AIREO43918 545 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 RCC1P18754 421 aaPredicted RBP12.83□□□□□ -0.36
UPF3A-208ENST00000484246 NFYBP25208 207 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 CEACAM3P40198 252 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 EFNB2P52799 333 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 PRRX1P54821 245 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 FOXL1Q12952 345 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 PLA2G7Q13093 441 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 HMGN3Q15651 99 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 PLAC9Q5JTB6 97 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 UTF1Q5T230 341 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 RFESDQ8TAC1 157 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 NDNFQ8TB73 568 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 GCDHQ92947 438 aaPredicted RBP12.83□□□□□ -0.36
UPF3A-208ENST00000484246 FAAP24Q9BTP7 215 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 RNF167Q9H6Y7 350 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 C12orf4Q9NQ89 552 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 PSG11Q9UQ72 335 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 MMP24Q9Y5R2 645 aa12.83□□□□□ -0.36
UPF3A-208ENST00000484246 A0A0B4J203 849 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 FAM172BPA6NC97 362 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 H3BUX3 64 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 HBZP02008 142 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 SLC2A2P11168 524 aaPredicted RBP12.82□□□□□ -0.36
UPF3A-208ENST00000484246 VEGFCP49767 419 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 HTD2P86397 168 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 SSX2Q16385 188 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 LY6G6FQ5SQ64 297 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 TPTE2P1Q5T6R2 138 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 Q6ZPA2 131 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 ARHGAP5-AS1Q96IT6 56 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 PECRQ9BY49 303 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 MRPS26Q9BYN8 205 aaKnown RBP12.82□□□□□ -0.36
UPF3A-208ENST00000484246 TAF9BQ9HBM6 251 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 RAB18Q9NP72 206 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 KCNIP1Q9NZI2 227 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 C1RLQ9NZP8 487 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 AK3Q9UIJ7 227 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 JPT1Q9UK76 154 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 MGAT4AQ9UM21 535 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 TCF19Q9Y242 345 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 ETV7Q9Y603 341 aa12.82□□□□□ -0.36
UPF3A-208ENST00000484246 SMIM30A4D0T7 59 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 METTL21EPA6NDL7 271 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 SDCBPO00560 298 aaPredicted RBP12.81□□□□□ -0.36
UPF3A-208ENST00000484246 MFNGO00587 321 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 SCGNO76038 276 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 ZNF137PP52743 207 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 AWAT1Q58HT5 328 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 STEAP3Q658P3 488 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 CCDC144NLQ6NUI1 221 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 Q6ZTK2 550 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 CROCCP3Q8IVE0 287 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 ZNF439Q8NDP4 499 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 OR10R2Q8NGX6 335 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 RAB3CQ96E17 227 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 FUNDC2Q9BWH2 189 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.81□□□□□ -0.36
UPF3A-208ENST00000484246 DAPK2Q9UIK4 370 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 KCNK7Q9Y2U2 307 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 STAB1Q9NY15 2570 aa12.81□□□□□ -0.36
UPF3A-208ENST00000484246 A0A1B0GUS0 222 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 SERPINE3A8MV23 424 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 CRYBA1P05813 215 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 CLEC2LP0C7M8 214 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 HIST1H1DP16402 221 aaKnown RBP12.8□□□□□ -0.36
UPF3A-208ENST00000484246 ALDH3B2P48448 385 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 ARHGDIBP52566 201 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 RELBQ01201 579 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 MADCAM1Q13477 382 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 ARL6IP1Q15041 203 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 MOGAT2Q3SYC2 334 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 OR4F5Q8NH21 305 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 OR1L1Q8NH94 360 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 LGALS14Q8TCE9 139 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 OCSTAMPQ9BR26 566 aa12.8□□□□□ -0.36
UPF3A-208ENST00000484246 ABCB10Q9NRK6 738 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms