RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 AMMECR1Q9Y4X0 333 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-225ENST00000483506 FBN3Q75N90 2809 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 UBE2QL1A1L167 161 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 A6NDX4 124 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 IFITM5A6NNB3 132 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 CHST1O43916 411 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 RAB3BP20337 219 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 CLDN12P56749 244 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 OR10A3P58181 314 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 C2orf76Q3KRA6 126 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 PLA1AQ53H76 456 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 NKAPLQ5M9Q1 402 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 TPTE2P1Q5T6R2 138 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 OR4K15Q8NH41 348 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 RANBP3Q9H6Z4 567 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-225ENST00000483506 GFOD1Q9NXC2 390 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 TRAPPC2LQ9UL33 140 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 HSF4Q9ULV5 492 aa14.49□□□□□ -0.09
HDAC6-225ENST00000483506 TNFAIP8O95379 198 aa14.48□□□□□ -0.09
HDAC6-225ENST00000483506 NAPSAO96009 420 aa14.48□□□□□ -0.09
HDAC6-225ENST00000483506 JUNBP17275 347 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-225ENST00000483506 RCC1P18754 421 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-225ENST00000483506 BLVRBP30043 206 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-225ENST00000483506 RAB13P51153 203 aa14.48□□□□□ -0.09
HDAC6-225ENST00000483506 HES5Q5TA89 166 aa14.48□□□□□ -0.09
HDAC6-225ENST00000483506 SHISA2Q6UWI4 295 aa14.48□□□□□ -0.09
HDAC6-225ENST00000483506 CCBE1Q6UXH8 406 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-225ENST00000483506 C6orf201Q7Z4U5 140 aa14.48□□□□□ -0.09
HDAC6-225ENST00000483506 NR2C2APQ86WQ0 139 aa14.48□□□□□ -0.09
HDAC6-225ENST00000483506 LINC00311Q8N616 119 aa14.48□□□□□ -0.09
HDAC6-225ENST00000483506 WFDC12Q8WWY7 111 aa14.48□□□□□ -0.09
HDAC6-225ENST00000483506 PITPNC1Q9UKF7 332 aa14.48□□□□□ -0.09
HDAC6-225ENST00000483506 TMEM272A0A1B0GTI8 110 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 HAX1O00165 279 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 SDCBPO00560 298 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-225ENST00000483506 SPINT2O43291 252 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 ARHGDIBP52566 201 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 PROK1P58294 105 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 NEDD8Q15843 81 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 LTC4SQ16873 150 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 CCDC144NLQ6NUI1 221 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 ZNF880Q6PDB4 577 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 TPRA1Q86W33 373 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 LEAP2Q969E1 77 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 FAAP24Q9BTP7 215 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 ZNF696Q9H7X3 374 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 RAB22AQ9UL26 194 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 SSR3Q9UNL2 185 aa14.47□□□□□ -0.09
HDAC6-225ENST00000483506 A0A087WXM4 84 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 TRBV6-6A0A0A6YYG2 114 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 TRIM64CA6NLI5 447 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 SOCS1O15524 211 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 HBZP02008 142 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 RAB6AP20340 208 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 BRS3P32247 399 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 KIR2DS4P43632 304 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 TMEM50BP56557 158 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 MADCAM1Q13477 382 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 ZNF439Q8NDP4 499 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 TSPAN14Q8NG11 270 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 OR56B1Q8NGI3 324 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 PTX4Q96A99 478 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 NPFFR1Q9GZQ6 430 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 OR51E2Q9H255 320 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 RIMS4Q9H426 269 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-225ENST00000483506 TAF9BQ9HBM6 251 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 PLEKHJ1Q9NW61 149 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 RNF114Q9Y508 228 aa14.46□□□□□ -0.09
HDAC6-225ENST00000483506 NOTOA8MTQ0 251 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 IGHV3-7P01780 117 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 GNG10P50151 68 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 HTD2P86397 168 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 PLA2G7Q13093 441 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 HMGN3Q15651 99 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 Q6ZPA2 131 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 MOB1BQ7L9L4 216 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 Q8N2B8 174 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 DTX3Q8N9I9 347 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 OR4C13Q8NGP0 309 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 OR1L1Q8NH94 360 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 UBALD1Q8TB05 177 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 RPEQ96AT9 228 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 OCSTAMPQ9BR26 566 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 LIN7BQ9HAP6 207 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 KCNIP1Q9NZI2 227 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 TRRAPQ9Y4A5 3859 aa14.45□□□□□ -0.1
HDAC6-225ENST00000483506 A0A1W2PPI3 338 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 FAM90A9PA6NNJ1 464 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 CD36P16671 472 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 MNDAP41218 407 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 VEGFCP49767 419 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 RAB7AP51149 207 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 ZNF816Q0VGE8 651 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-225ENST00000483506 LY6G6FQ5SQ64 297 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 STEAP3Q658P3 488 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 SLC25A48Q6ZT89 311 aaKnown RBP14.44□□□□□ -0.1
HDAC6-225ENST00000483506 C16orf82Q7Z2V1 217 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 TMEM219Q86XT9 240 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 OR8H3Q8N146 312 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 OR10X1Q8NGY0 326 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms