RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 IGKV1-27A0A075B6S5 117 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 TMEM210A6NLX4 147 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 LCATP04180 440 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 CCL4P13236 92 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 CD33P20138 364 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 OR10J1P30954 320 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 CCKARP32238 428 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 RAB7AP51149 207 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 UCP3P55916 312 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 ZNF506Q5JVG8 444 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 SLC25A26Q70HW3 274 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 LGI3Q8N145 548 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 BATF2Q8N1L9 274 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 SPEM1Q8N4L4 309 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 RTN4IP1Q8WWV3 396 aaPredicted RBP10.7□□□□□ -0.7
CCDC78-213ENST00000482878 TMEM54Q969K7 222 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 PCGF1Q9BSM1 259 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 NAA60Q9H7X0 242 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 A0A1B0GU03 582 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 CEBPZOSA8MTT3 80 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 H7BYZ3 331 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 ZNF728P0DKX0 622 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 BRS3P32247 399 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 RPS18P62269 152 aaKnown RBP10.7□□□□□ -0.7
CCDC78-213ENST00000482878 HIST1H3AP68431 136 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 AARDQ4LEZ3 155 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 Q6ZSR3 168 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 DEFB123Q8N688 67 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 CDX2Q99626 313 aaPredicted RBP10.7□□□□□ -0.7
CCDC78-213ENST00000482878 TRBV24-1A0A075B6N3 115 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 HBE1P02100 147 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 LMO1P25800 156 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 C9orf135Q5VTT2 229 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 C16orf82Q7Z2V1 217 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 CDH20Q9HBT6 801 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 NECAP2Q9NVZ3 263 aa10.7□□□□□ -0.7
CCDC78-213ENST00000482878 PIEZO2Q9H5I5 2752 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 FRYQ5TBA9 3013 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 DHHO43323 396 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 DUSP1P28562 367 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 CHRNB4P30926 498 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 FGF8P55075 233 aaPredicted RBP10.69□□□□□ -0.7
CCDC78-213ENST00000482878 CLDND2Q8NHS1 167 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 NCOA6Q14686 2063 aaPredicted RBP10.69□□□□□ -0.7
CCDC78-213ENST00000482878 IGHV3-9P01782 118 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 GALR1P47211 349 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 SRYQ05066 204 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 PNRC1Q12796 327 aaPredicted RBP10.69□□□□□ -0.7
CCDC78-213ENST00000482878 COL5A1-AS1Q5SY13 56 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 FOXL2NBQ6ZUU3 175 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 OR2C3Q8N628 320 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 OR5C1Q8NGR4 320 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 OR11L1Q8NGX0 322 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 RBMXL1Q96E39 390 aaKnown RBP10.69□□□□□ -0.7
CCDC78-213ENST00000482878 TP53RKQ96S44 253 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 PPIAL4AQ9Y536 164 aa10.69□□□□□ -0.7
CCDC78-213ENST00000482878 B4E171 279 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 CCNOP22674 350 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 LEMD1Q68G75 181 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 SLC2A9Q9NRM0 540 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 MYO7BQ6PIF6 2116 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 NPIPA2E9PIF3 369 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 NPIPA3F8WFD2 350 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 SSSCA1O60232 199 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 HLA-HP01893 362 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 SPINK2P20155 84 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 RND2P52198 227 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 MLF1P58340 268 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 GNB2P62879 340 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 SHBQ15464 509 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 PIGYQ3MUY2 71 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 C10orf35Q96D05 121 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 C18orf12Q96KH6 178 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 ZNF665Q9H7R5 613 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 LNP1A1A4G5 178 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 PHF1O43189 567 aaPredicted RBP10.68□□□□□ -0.7
CCDC78-213ENST00000482878 IL13RA2Q14627 380 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 PDCD1Q15116 288 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 SPTSSAQ969W0 71 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 RPUSD4Q96CM3 377 aaKnown RBP10.68□□□□□ -0.7
CCDC78-213ENST00000482878 MSI2Q96DH6 328 aaKnown RBP10.68□□□□□ -0.7
CCDC78-213ENST00000482878 SMIM7Q9BQ49 75 aa10.68□□□□□ -0.7
CCDC78-213ENST00000482878 LIAT1Q6ZQX7 453 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 ZIC4Q8N9L1 334 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 ACY3Q96HD9 319 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 VPS25Q9BRG1 176 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 ULBP2Q9BZM5 246 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 P4HTMQ9NXG6 502 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 ADAMTS20P59510 1910 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 IGKV1-12A0A0C4DH73 117 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 A0A1W2PQM1 296 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 IGKV1D-12P01611 117 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 TMEM11P17152 192 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 DTYMKP23919 212 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 ZNF92Q03936 586 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 PRSS8Q16651 343 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 MAJINQ3KP22 176 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 ZNF787Q6DD87 383 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 SPSB1Q96BD6 273 aa10.67□□□□□ -0.7
CCDC78-213ENST00000482878 PCED1AQ9H1Q7 454 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms