RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 USE1Q9NZ43 259 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 STMN3Q9NZ72 180 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 PDP1Q9P0J1 537 aaPredicted RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 RABL2BQ9UNT1 228 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 SLC35A3Q9Y2D2 325 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 C15orf41Q9Y2V0 281 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 YARS2Q9Y2Z4 477 aaKnown RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 LRRC42Q9Y546 428 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 ORC6Q9Y5N6 252 aa2.33□□□□□ -2.04
CBX3-207ENST00000481300 EP300Q09472 2414 aaPredicted RBP2.33□□□□□ -2.04
CBX3-207ENST00000481300 MYLKQ15746 1914 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 MUC3AQ02505 3323 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 A0A087WUU8 490 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 IGHV3-74A0A0B4J1X5 117 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 A0A1B0GWA3 101 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 A0A1W2PQD3 144 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 ARRDC5A6NEK1 342 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 ARGFXA6NJG6 315 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 CDC40O60508 579 aaKnown RBP eCLIP2.32□□□□□ -2.04
CBX3-207ENST00000481300 SNAP29O95721 258 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 HLA-DPB1P04440 258 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 ANXA8P13928 327 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 CXCR1P25024 350 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 EVI2BP34910 448 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 IFNGR2P38484 337 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 IDH2P48735 452 aaKnown RBP2.32□□□□□ -2.04
CBX3-207ENST00000481300 DAPP51397 102 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 AQP4P55087 323 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 LINC00315P59091 139 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 ARG2P78540 354 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 ZNF117Q03924 483 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 MERTKQ12866 999 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 SKP2Q13309 424 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 MAB21L1Q13394 359 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 DEFB109BQ30KR1 87 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 NDUFAF6Q330K2 333 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 ZNF791Q3KP31 576 aaPredicted RBP2.32□□□□□ -2.04
CBX3-207ENST00000481300 C6orf52Q5T4I8 152 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 RAET1LQ5VY80 246 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 KDM4DQ6B0I6 523 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 H3F3CQ6NXT2 135 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 ULK3Q6PHR2 472 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 RTL4Q6ZR62 310 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 NCCRP1Q6ZVX7 275 aaPredicted RBP2.32□□□□□ -2.04
CBX3-207ENST00000481300 MBOAT2Q6ZWT7 520 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 NKAIN4Q8IVV8 208 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 H1FOOQ8IZA3 346 aaPredicted RBP2.32□□□□□ -2.04
CBX3-207ENST00000481300 OFCC1Q8IZS5 231 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 LINC00471Q8N535 108 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 ZNF555Q8NEP9 628 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 OR4K17Q8NGC6 315 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 OR5B3Q8NH48 314 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 OR5W2Q8NH69 310 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 ZNF563Q8TA94 476 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 GNPDA2Q8TDQ7 276 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 GPR119Q8TDV5 335 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 TMEM239Q8WW34 195 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 PSMF1Q92530 271 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 RDH12Q96NR8 316 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 MYCBPQ99417 103 aaPredicted RBP2.32□□□□□ -2.04
CBX3-207ENST00000481300 UTP23Q9BRU9 249 aaKnown RBP2.32□□□□□ -2.04
CBX3-207ENST00000481300 OSBPL11Q9BXB4 747 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 GABARAPL1Q9H0R8 117 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 DSN1Q9H410 356 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 SDHAF3Q9NRP4 125 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 MED11Q9P086 117 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 ZNF222Q9UK12 451 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 SCN8AQ9UQD0 1980 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 ATG2BQ96BY7 2078 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 SPAG17Q6Q759 2223 aa2.32□□□□□ -2.04
CBX3-207ENST00000481300 MUC6Q6W4X9 2439 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 CUL9Q8IWT3 2517 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 ZNF106Q9H2Y7 1883 aaKnown RBP2.31□□□□□ -2.04
CBX3-207ENST00000481300 A0A087WUJ7 227 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 IGLV3-32A0A0A0MS00 114 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 TMED7-TICAM2A0A0A6YYA0 188 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 A0A0B4J2E0 115 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 LOC100130705A0A1B0GUX0 176 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 A0A1B0GX12 115 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 C17orf51A8MQB3 221 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 EFCAB9A8MZ26 197 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 KPNA4O00629 521 aaPredicted RBP2.31□□□□□ -2.04
CBX3-207ENST00000481300 BCKDKO14874 412 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 DENRO43583 198 aaKnown RBP2.31□□□□□ -2.04
CBX3-207ENST00000481300 CHP2O43745 196 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 OR2J3O76001 311 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 CLPXO76031 633 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 RCBTB2O95199 551 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 SOX14O95416 240 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 RPSAP08865 295 aaKnown RBP2.31□□□□□ -2.04
CBX3-207ENST00000481300 TLX1NBP0CAT3 122 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 CCL3P10147 92 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 IFI30P13284 250 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 ZNF250P15622 560 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 IGFBP3P17936 291 aaPredicted RBP2.31□□□□□ -2.04
CBX3-207ENST00000481300 RAB3BP20337 219 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 PTNP21246 168 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 GSTM3P21266 225 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 F2RP25116 425 aa2.31□□□□□ -2.04
CBX3-207ENST00000481300 POLR2IP36954 125 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms