RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CCDC58Q4VC31 144 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 KLHL22Q53GT1 634 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 FAM53AQ6NSI3 398 aaPredicted RBP10.38□□□□□ -0.75
VCL-205ENST00000478896 ZFP1Q6P2D0 407 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 RPL22L1Q6P5R6 122 aaKnown RBP10.38□□□□□ -0.75
VCL-205ENST00000478896 C8orf31Q8N9H6 132 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 TMEM104Q8NE00 496 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 OR8H1Q8NGG4 311 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 OR10V1Q8NGI7 309 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 ZNF184Q99676 751 aaPredicted RBP10.38□□□□□ -0.75
VCL-205ENST00000478896 HSPB9Q9BQS6 159 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 C9orf16Q9BUW7 83 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 LOC100130705A0A1B0GUX0 176 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 A0A1W2PP11 408 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 ZNF736B4DX44 427 aaPredicted RBP10.37□□□□□ -0.75
VCL-205ENST00000478896 SLC31A2O15432 143 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 OR5H8P0DN80 308 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 SLC2A2P11168 524 aaPredicted RBP10.37□□□□□ -0.75
VCL-205ENST00000478896 MYF6P23409 242 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 GPR176Q14439 515 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 MMDQ15546 238 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 Q3ZCU0 254 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 C6orf183Q5T699 404 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 SYT6Q5T7P8 510 aaPredicted RBP10.37□□□□□ -0.75
VCL-205ENST00000478896 XAF1Q6GPH4 301 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 TMPRSS11AQ6ZMR5 421 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 ZNF497Q6ZNH5 498 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 SLC25A48Q6ZT89 311 aaKnown RBP10.37□□□□□ -0.75
VCL-205ENST00000478896 FAM71E2Q8N5Q1 922 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 OR11H1Q8NG94 326 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 OR4K15Q8NH41 348 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 RHOXF1Q8NHV9 184 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 ST6GALNAC6Q969X2 333 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 ORAI1Q96D31 301 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 ASCL2Q99929 193 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 SPACA1Q9HBV2 294 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 ETAA1Q9NY74 926 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 CKLFQ9UBR5 152 aa10.37□□□□□ -0.75
VCL-205ENST00000478896 ZNF107Q9UII5 783 aaPredicted RBP10.37□□□□□ -0.75
VCL-205ENST00000478896 LSM4Q9Y4Z0 139 aaKnown RBP10.37□□□□□ -0.75
VCL-205ENST00000478896 C12orf77C9JDV5 145 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 MCRIP1C9JLW8 97 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 H3BNX3 289 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 IGHG4P01861 327 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 MT-ND4P03905 459 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 LIMS3P0CW19 117 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 LIMS4P0CW20 117 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 F2RL1P55085 397 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 CFHR3Q02985 330 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 TMEM30BQ3MIR4 351 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 OR2G6Q5TZ20 316 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 TMEM65Q6PI78 240 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 RNF152Q8N8N0 203 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 OR13C5Q8NGS8 318 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 SMIM19Q96E16 107 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 RBMXL1Q96E39 390 aaKnown RBP10.36□□□□□ -0.75
VCL-205ENST00000478896 KCTD7Q96MP8 289 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 PLSCR3Q9NRY6 295 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 ZNF256Q9Y2P7 627 aaPredicted RBP10.36□□□□□ -0.75
VCL-205ENST00000478896 DNAH9Q9NYC9 4486 aa10.36□□□□□ -0.75
VCL-205ENST00000478896 HBZP02008 142 aa10.35□□□□□ -0.75
VCL-205ENST00000478896 OR8U8P0C7N1 319 aa10.35□□□□□ -0.75
VCL-205ENST00000478896 MYL12AP19105 171 aa10.35□□□□□ -0.75
VCL-205ENST00000478896 PSMB8P28062 276 aa10.35□□□□□ -0.75
VCL-205ENST00000478896 ZNF137PP52743 207 aa10.35□□□□□ -0.75
VCL-205ENST00000478896 NKAPLQ5M9Q1 402 aa10.35□□□□□ -0.75
VCL-205ENST00000478896 AWAT2Q6E213 333 aa10.35□□□□□ -0.75
VCL-205ENST00000478896 TRAT1Q6PIZ9 186 aa10.35□□□□□ -0.75
VCL-205ENST00000478896 JAGN1Q8N5M9 183 aa10.35□□□□□ -0.75
VCL-205ENST00000478896 APH1BQ8WW43 257 aa10.35□□□□□ -0.75
VCL-205ENST00000478896 MRPS18AQ9NVS2 196 aaKnown RBP10.35□□□□□ -0.75
VCL-205ENST00000478896 MRPS28Q9Y2Q9 187 aaKnown RBP10.35□□□□□ -0.75
VCL-205ENST00000478896 MAGEA13PA6NCF6 341 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 IGF1P05019 195 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 DCKP27707 260 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 ETV1P50549 477 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 ZNF134P52741 427 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 LSAMPQ13449 338 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 FHL3Q13643 280 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 SMN1Q16637 294 aaKnown RBP10.34□□□□□ -0.75
VCL-205ENST00000478896 CT45A1Q5HYN5 189 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 RAB12Q6IQ22 244 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 GLIPR1L1Q6UWM5 242 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 ZNF439Q8NDP4 499 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 ZNF555Q8NEP9 628 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 OR1L1Q8NH94 360 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 CT45A3Q8NHU0 189 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 MUL1Q969V5 352 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 OR5B12Q96R08 314 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 ZNF251Q9BRH9 671 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 FGF20Q9NP95 211 aaPredicted RBP10.34□□□□□ -0.75
VCL-205ENST00000478896 OR2S2Q9NQN1 319 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 PARP11Q9NR21 331 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 RCC2Q9P258 522 aaKnown RBP10.34□□□□□ -0.75
VCL-205ENST00000478896 SCOCQ9UIL1 159 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 PEX16Q9Y5Y5 336 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 SMAD5-AS1Q9Y6J3 95 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 RYR3Q15413 4870 aa10.34□□□□□ -0.75
VCL-205ENST00000478896 IRGMA1A4Y4 181 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 C3orf84H3BNL1 204 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms