RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 RBM48Q5RL73 367 aaKnown RBP17.35■□□□□ 0.37
COL9A3-211ENST00000477612 TRAT1Q6PIZ9 186 aa17.35■□□□□ 0.37
COL9A3-211ENST00000477612 TMEM91Q6ZNR0 172 aa17.35■□□□□ 0.37
COL9A3-211ENST00000477612 C11orf44Q8N8P7 122 aa17.35■□□□□ 0.37
COL9A3-211ENST00000477612 MBNL3Q9NUK0 354 aaKnown RBP17.35■□□□□ 0.37
COL9A3-211ENST00000477612 TRAPPC2LQ9UL33 140 aa17.35■□□□□ 0.37
COL9A3-211ENST00000477612 C12orf77C9JDV5 145 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 SDCBPO00560 298 aaPredicted RBP17.34■□□□□ 0.37
COL9A3-211ENST00000477612 SLC22A1O15245 554 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 PDCD6O75340 191 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 FBXO24O75426 580 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 VSIG8P0DPA2 414 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 PSMA1P25786 263 aaKnown RBP17.34■□□□□ 0.37
COL9A3-211ENST00000477612 C6orf183Q5T699 404 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 ZNF554Q86TJ5 538 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 OR10X1Q8NGY0 326 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 OR4K15Q8NH41 348 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 CAPSLQ8WWF8 208 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 ST6GALNAC6Q969X2 333 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 TM2D1Q9BX74 207 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 RAB26Q9ULW5 256 aa17.34■□□□□ 0.37
COL9A3-211ENST00000477612 NOTCH1P46531 2555 aa17.33■□□□□ 0.36
COL9A3-211ENST00000477612 SNRNP70P08621 437 aaKnown RBP17.33■□□□□ 0.36
COL9A3-211ENST00000477612 CD28P10747 220 aa17.33■□□□□ 0.36
COL9A3-211ENST00000477612 HTR2CP28335 458 aa17.33■□□□□ 0.36
COL9A3-211ENST00000477612 QRFPP83859 136 aa17.33■□□□□ 0.36
COL9A3-211ENST00000477612 EBI3Q14213 229 aa17.33■□□□□ 0.36
COL9A3-211ENST00000477612 ZNF439Q8NDP4 499 aa17.33■□□□□ 0.36
COL9A3-211ENST00000477612 FAM46BQ96A09 425 aa17.33■□□□□ 0.36
COL9A3-211ENST00000477612 MGLLQ99685 303 aa17.33■□□□□ 0.36
COL9A3-211ENST00000477612 A0A1W2PPE3 182 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 TMEM14DPA8MWL7 114 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 SPINT2O43291 252 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 KCNAB3O43448 404 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 PEX14O75381 377 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 MPIG6BO95866 241 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 GAPDHP04406 335 aaKnown RBP17.32■□□□□ 0.36
COL9A3-211ENST00000477612 RPS27AP62979 156 aaKnown RBP17.32■□□□□ 0.36
COL9A3-211ENST00000477612 EMX1Q04741 257 aaPredicted RBP17.32■□□□□ 0.36
COL9A3-211ENST00000477612 TMEM95Q3KNT9 176 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 ABCA11PQ4W5N1 156 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 ARSJQ5FYB0 599 aaPredicted RBP17.32■□□□□ 0.36
COL9A3-211ENST00000477612 HIST2H2BDQ6DRA6 164 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 NDUFA11Q86Y39 141 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 DRAM1Q8N682 238 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 OR56B4Q8NH76 319 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 KCNG3Q8TAE7 436 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 FAM110DQ8TAY7 271 aaPredicted RBP17.32■□□□□ 0.36
COL9A3-211ENST00000477612 TMEM203Q969S6 136 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 CCDC90BQ9GZT6 254 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 MOB4Q9Y3A3 225 aa17.32■□□□□ 0.36
COL9A3-211ENST00000477612 ADARB2-AS1A8MUL3 147 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 HSD17B6O14756 317 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 HBZP02008 142 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 HSMCR30P0CW71 290 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 RCC1P18754 421 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-211ENST00000477612 CHATP28329 748 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 ZNF137PP52743 207 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 RPS25P62851 125 aaKnown RBP17.31■□□□□ 0.36
COL9A3-211ENST00000477612 DEFA6Q01524 100 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 UNC119Q13432 240 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 TBCEQ15813 527 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-211ENST00000477612 STEAP3Q658P3 488 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 OR10K2Q6IF99 312 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 FAM53AQ6NSI3 398 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-211ENST00000477612 SLC25A48Q6ZT89 311 aaKnown RBP17.31■□□□□ 0.36
COL9A3-211ENST00000477612 OR6M1Q8NGM8 313 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 UBALD1Q8TB05 177 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 MRPL30Q8TCC3 161 aaKnown RBP17.31■□□□□ 0.36
COL9A3-211ENST00000477612 CYYR1Q96J86 154 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 GFI1Q99684 422 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 TMEM59Q9BXS4 323 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 BLOC1S6Q9UL45 172 aa17.31■□□□□ 0.36
COL9A3-211ENST00000477612 IGHV3-43A0A0B4J1X8 118 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 IGHV1-3A0A0C4DH29 117 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 UBE2QL1A1L167 161 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 CCRL2O00421 344 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 FGF16O43320 207 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 ARL6IP5O75915 188 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 BPNT1O95861 308 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 OPN1MWP04001 364 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 LPLP06858 475 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 OPN1MW2P0DN77 364 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 OPN1MW3P0DN78 364 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 IGHV3-43DP0DP04 118 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 MAP2K4P45985 399 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 CD83Q01151 205 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 CNBD2Q96M20 576 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 CITED2Q99967 270 aaPredicted RBP17.3■□□□□ 0.36
COL9A3-211ENST00000477612 TAF9BQ9HBM6 251 aa17.3■□□□□ 0.36
COL9A3-211ENST00000477612 ATP6V1G2O95670 118 aa17.29■□□□□ 0.36
COL9A3-211ENST00000477612 ZNF134P52741 427 aa17.29■□□□□ 0.36
COL9A3-211ENST00000477612 IZUMO1Q8IYV9 350 aa17.29■□□□□ 0.36
COL9A3-211ENST00000477612 OR5AU1Q8NGC0 362 aa17.29■□□□□ 0.36
COL9A3-211ENST00000477612 OR1L1Q8NH94 360 aa17.29■□□□□ 0.36
COL9A3-211ENST00000477612 NEDD4LQ96PU5 975 aa17.29■□□□□ 0.36
COL9A3-211ENST00000477612 SULT4A1Q9BR01 284 aa17.29■□□□□ 0.36
COL9A3-211ENST00000477612 SLC17A2O00624 439 aa17.28■□□□□ 0.36
COL9A3-211ENST00000477612 TMEM11P17152 192 aa17.28■□□□□ 0.36
COL9A3-211ENST00000477612 IL3RAP26951 378 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms