RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 POMT1Q9Y6A1 747 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 RAB27BO00194 218 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 DEGS1O15121 323 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 OR7C1O76099 320 aaPredicted RBP14.29□□□□□ -0.12
PTPN7-209ENST00000477554 TPPPO94811 219 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 BLVRBP30043 206 aaPredicted RBP14.29□□□□□ -0.12
PTPN7-209ENST00000477554 RAG2P55895 527 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 FOXL1Q12952 345 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 FBLN7Q53RD9 439 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 TMEM69Q5SWH9 247 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 CCDC190Q86UF4 302 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 BEND2Q8NDZ0 799 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 PPP1R35Q8TAP8 253 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 S100ZQ8WXG8 99 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 NEDD4LQ96PU5 975 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 SSX3Q99909 188 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 LINC00312Q9Y6C7 94 aa14.29□□□□□ -0.12
PTPN7-209ENST00000477554 A0A0A6YYD4 124 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 hADV38S2A0JD32 116 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 FABP12A6NFH5 140 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 ARG1P05089 322 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 FUT3P21217 361 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 ETV6P41212 452 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 MEF2CQ06413 473 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-209ENST00000477554 MIDNQ504T8 468 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 Q6ZSV7 163 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 Q6ZTK2 550 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 CHST4Q8NCG5 386 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 C15orf40Q8WUR7 153 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 RAB3CQ96E17 227 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 HEXA-AS1Q9H8Q6 139 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 HSF4Q9ULV5 492 aa14.28□□□□□ -0.12
PTPN7-209ENST00000477554 ODAMA1E959 279 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 SOCS1O15524 211 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 PDCD6O75340 191 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 PTBP1P26599 531 aaKnown RBP eCLIP14.27□□□□□ -0.125e-9■■■■□ 20.4
PTPN7-209ENST00000477554 ERP29P30040 261 aaKnown RBP14.27□□□□□ -0.12
PTPN7-209ENST00000477554 ZNF45Q02386 682 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 LSAMPQ13449 338 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 C17orf58Q2M2W7 97 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 KRBOX4Q5JUW0 171 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 ZNF626Q68DY1 528 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 FAM53AQ6NSI3 398 aaPredicted RBP14.27□□□□□ -0.12
PTPN7-209ENST00000477554 CCBE1Q6UXH8 406 aaPredicted RBP14.27□□□□□ -0.12
PTPN7-209ENST00000477554 TRAPPC6BQ86SZ2 158 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 OR13A1Q8NGR1 328 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 DYRK2Q92630 601 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 TSC22D3Q99576 134 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 ZNF747Q9BV97 191 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 PLEKHJ1Q9NW61 149 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 VPREB3Q9UKI3 123 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 SIGLEC9Q9Y336 463 aa14.27□□□□□ -0.12
PTPN7-209ENST00000477554 TRAV18A0A075B6X5 111 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 IGHV2-26A0A0B4J1V2 119 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 A0A1W2PPH5 198 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 FOXI3A8MTJ6 420 aaPredicted RBP14.26□□□□□ -0.13
PTPN7-209ENST00000477554 CHST1O43916 411 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 IGHV3-7P01780 117 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 GLAP06280 429 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 MNDAP41218 407 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 TMEM50BP56557 158 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 PITPNAQ00169 270 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 IL18Q14116 193 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 MOGAT2Q3SYC2 334 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 ATAD3CQ5T2N8 411 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 SIGIRRQ6IA17 410 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 FAM131AQ6UXB0 335 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 OR11H6Q8NGC7 330 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 LINC01006Q8NI28 216 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 MEGF9Q9H1U4 602 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 RCC2Q9P258 522 aaKnown RBP14.26□□□□□ -0.13
PTPN7-209ENST00000477554 KIF25Q9UIL4 384 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 SESN1Q9Y6P5 492 aa14.26□□□□□ -0.13
PTPN7-209ENST00000477554 GSTP1P09211 210 aaKnown RBP14.25□□□□□ -0.13
PTPN7-209ENST00000477554 CGB3P0DN86 165 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 CGB7P0DN87 165 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 HIST1H1DP16402 221 aaKnown RBP14.25□□□□□ -0.13
PTPN7-209ENST00000477554 CHATP28329 748 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 TAS2R20P59543 309 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 RBM39Q14498 530 aaKnown RBP14.25□□□□□ -0.13
PTPN7-209ENST00000477554 SSX2Q16385 188 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 PAN3Q58A45 887 aaKnown RBP14.25□□□□□ -0.13
PTPN7-209ENST00000477554 RSBN1Q5VWQ0 802 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-209ENST00000477554 PYHIN1Q6K0P9 492 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 SUMF2Q8NBJ7 301 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 UBALD1Q8TB05 177 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 LEAP2Q969E1 77 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 ARHGAP5-AS1Q96IT6 56 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 SOSTQ9BQB4 213 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 PECRQ9BY49 303 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 TMEM133Q9H2Q1 129 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 DPAGT1Q9H3H5 408 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 ZNF286AQ9HBT8 521 aa14.25□□□□□ -0.13
PTPN7-209ENST00000477554 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.25□□□□□ -0.13
PTPN7-209ENST00000477554 MRPS7Q9Y2R9 242 aaKnown RBP14.25□□□□□ -0.13
PTPN7-209ENST00000477554 SERPINE3A8MV23 424 aa14.24□□□□□ -0.13
PTPN7-209ENST00000477554 MCRIP1C9JLW8 97 aa14.24□□□□□ -0.13
PTPN7-209ENST00000477554 NDUFA7O95182 113 aa14.24□□□□□ -0.13
PTPN7-209ENST00000477554 RBP4P02753 201 aa14.24□□□□□ -0.13
PTPN7-209ENST00000477554 CSN2P05814 226 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms