RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 GNG13Q9P2W3 67 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 NAT8Q9UHE5 227 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 URGCP-MRPS24S4R325 110 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 CFAP47Q6ZTR5 3102 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 ATRXP46100 2492 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 ZNF205O95201 554 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 TIAF1O95411 115 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 SRD5A2P31213 254 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 RUNX1Q01196 453 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 DAZAP2Q15038 168 aaPredicted RBP11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 TMEM41BQ5BJD5 291 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 CYP2G1PQ6ZSU1 146 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 SLC25A26Q70HW3 274 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 THNSL2Q86YJ6 484 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 RAB24Q969Q5 203 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 C2orf88Q9BSF0 95 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 STRADBQ9C0K7 418 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 CRLF2Q9HC73 371 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 LRFN1Q9P244 771 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 SPAG17Q6Q759 2223 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 PKD1L2Q7Z442 2459 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 TNRC6AQ8NDV7 1962 aaKnown RBP11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 IGHV3-15A0A0B4J1V0 119 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 ZNF716A6NP11 495 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 C9J4A7 227 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 FAM90A26D6RGX4 464 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 TMEM250H0YL14 139 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 DEGS1O15121 323 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 SLC31A2O15432 143 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 PGLYRP1O75594 196 aaPredicted RBP11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 GCGP01275 180 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 COX5BP10606 129 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 TAS2R60P59551 318 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 AAED1Q7RTV5 226 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 CENPVQ7Z7K6 275 aaPredicted RBP11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 TMEM217Q8N7C4 229 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 BEND2Q8NDZ0 799 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 ZNF845Q96IR2 970 aaPredicted RBP11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 HIST1H2BLQ99880 126 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 P4HTMQ9NXG6 502 aa11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 MRPS17Q9Y2R5 130 aaKnown RBP11.59□□□□□ -0.55
HLA-DMA-208ENST00000477541 A0A087X0M5 115 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 IGHV1-45A0A0A0MS14 117 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 A0A1B0GX30 115 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 KIAA1324LA8MWY0 1029 aaPredicted RBP11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 TNFSF11O14788 317 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 SERPINE2P07093 398 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 FABP4P15090 132 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 MDH2P40926 338 aaKnown RBP11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 GAMTQ14353 236 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 LRRC75BQ2VPJ9 315 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZNF880Q6PDB4 577 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 BRICD5Q6PL45 260 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 TMEM45BQ96B21 275 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 SGCZQ96LD1 299 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 IMMP1LQ96LU5 166 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 JSRP1Q96MG2 331 aaPredicted RBP11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 SRXN1Q9BYN0 137 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 PROK2Q9HC23 129 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 RPRMQ9NS64 109 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 CA14Q9ULX7 337 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 MRPS18CQ9Y3D5 142 aaKnown RBP11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 OR2W1Q9Y3N9 320 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 ASXL3Q9C0F0 2248 aa11.58□□□□□ -0.56
HLA-DMA-208ENST00000477541 ST8SIA5O15466 376 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 CCL3P10147 92 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 FGF5P12034 268 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 APLNRP35414 380 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZFP36L1Q07352 338 aaKnown RBP11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 HERPUD1Q15011 391 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 CEACAM21Q3KPI0 293 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 MOB1BQ7L9L4 216 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 CALHM1Q8IU99 346 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZNF525Q8N782 197 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZNF837Q96EG3 531 aaPredicted RBP11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 GPR87Q9BY21 358 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 CCL28Q9NRJ3 127 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 MAP1BP46821 2468 aaKnown RBP11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 EML6Q6ZMW3 1958 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 IGKV1D-13A0A0B4J2D9 117 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 IGHV5-10-1A0A0J9YXX1 117 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 TRAPPC2LH3BP13 241 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 SYNGR2O43760 224 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 MBP02144 154 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 MMP7P09237 267 aaPredicted RBP11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 SCTP09683 121 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 IGKV1-13P0DP09 117 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 B4GALT1P15291 398 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 IL2RGP31785 369 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 PDLIM4P50479 330 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 FAM3BP58499 235 aaPredicted RBP11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 RPS18P62269 152 aaKnown RBP11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 IL11RAQ14626 422 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 WDR25Q64LD2 544 aaPredicted RBP11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 ZDHHC23Q8IYP9 409 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 GPR146Q96CH1 333 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 GPR35Q9HC97 309 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 TP53TG5Q9Y2B4 290 aa11.57□□□□□ -0.56
HLA-DMA-208ENST00000477541 RFNGQ9Y644 331 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms