RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ZNF695Q8IW36 515 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 FOXRED2Q8IWF2 684 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 Q8N6K4 173 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 OR4K15Q8NH41 348 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 OR1L1Q8NH94 360 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 RTN4IP1Q8WWV3 396 aaPredicted RBP9.16□□□□□ -0.94
VARS2-208ENST00000477052 DPF1Q92782 380 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 MUL1Q969V5 352 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 CPNE2Q96FN4 548 aaPredicted RBP9.16□□□□□ -0.94
VARS2-208ENST00000477052 BANF2Q9H503 90 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 FGF20Q9NP95 211 aaPredicted RBP9.16□□□□□ -0.94
VARS2-208ENST00000477052 TMEM138Q9NPI0 162 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 PLSCR3Q9NRY6 295 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 GFOD1Q9NXC2 390 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 RYR3Q15413 4870 aa9.16□□□□□ -0.94
VARS2-208ENST00000477052 IRGMA1A4Y4 181 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 C12orf77C9JDV5 145 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 AIPO00170 330 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 CCL24O00175 119 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 GZMHP20718 246 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 KCNJ3P48549 501 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 SLC35B1P78383 322 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 PAX5Q02548 391 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 DOC2BQ14184 412 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 SYT6Q5T7P8 510 aaPredicted RBP9.15□□□□□ -0.94
VARS2-208ENST00000477052 LAIR2Q6ISS4 152 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 ZNF497Q6ZNH5 498 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 TMEM104Q8NE00 496 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 OR10A7Q8NGE5 316 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 OR2T10Q8NGZ9 312 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 GHSRQ92847 366 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 ST6GALNAC6Q969X2 333 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 PRR25Q96S07 402 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 S100A13Q99584 98 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 ANKRD60Q9BZ19 345 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 ABCG5Q9H222 651 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 PLCXD1Q9NUJ7 323 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 BABAM2Q9NXR7 383 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 IL36GQ9NZH8 169 aa9.15□□□□□ -0.94
VARS2-208ENST00000477052 UBE2QL1A1L167 161 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 OGG1O15527 345 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 SLC2A2P11168 524 aaPredicted RBP9.14□□□□□ -0.95
VARS2-208ENST00000477052 IGFBP3P17936 291 aaPredicted RBP9.14□□□□□ -0.95
VARS2-208ENST00000477052 RCC1P18754 421 aaPredicted RBP9.14□□□□□ -0.95
VARS2-208ENST00000477052 MYF6P23409 242 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 DCKP27707 260 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 RPS11P62280 158 aaKnown RBP eCLIP9.14□□□□□ -0.95
VARS2-208ENST00000477052 GPR50Q13585 617 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 GNMTQ14749 295 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 PNLIPRP3Q17RR3 467 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 CT45A1Q5HYN5 189 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 NHLRC3Q5JS37 347 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 TEX38Q6PEX7 206 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 GLIPR1L1Q6UWM5 242 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 TMPRSS11AQ6ZMR5 421 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 SLC16A12Q6ZSM3 486 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 TGIF2LXQ8IUE1 241 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 IZUMO1Q8IYV9 350 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 JAGN1Q8N5M9 183 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 CT45A3Q8NHU0 189 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 RITA1Q96K30 269 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 OR14A2Q96R54 314 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 S1PR3Q99500 378 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 B9D2Q9BPU9 175 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 IFT22Q9H7X7 185 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 ZFP57Q9NU63 452 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 CNOT2Q9NZN8 540 aaKnown RBP9.14□□□□□ -0.95
VARS2-208ENST00000477052 GNG12Q9UBI6 72 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 TRAPPC2LQ9UL33 140 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 RAB26Q9ULW5 256 aa9.14□□□□□ -0.95
VARS2-208ENST00000477052 MRPS28Q9Y2Q9 187 aaKnown RBP9.14□□□□□ -0.95
VARS2-208ENST00000477052 TENM3Q9P273 2699 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 TRBV5-5A0A0J9YX44 114 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 EFCAB10A6NFE3 127 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 AP4M1O00189 453 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 MOSP00540 346 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 HBZP02008 142 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 MAS1P04201 325 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 GTF2F2P13984 249 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 CNTFRP26992 372 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 DGCR2P98153 550 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 MPV17LQ2QL34 196 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 CCDC58Q4VC31 144 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 DMKNQ6E0U4 476 aaPredicted RBP9.13□□□□□ -0.95
VARS2-208ENST00000477052 RAB12Q6IQ22 244 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 UNQ9370/PRO34162Q6UXP9 181 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 LINC00311Q8N616 119 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 ZNF439Q8NDP4 499 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 OR52L2PQ8NGH6 319 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 GGHQ92820 318 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 SMIM19Q96E16 107 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 OR5B12Q96R08 314 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 TSC22D3Q99576 134 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 ASCL2Q99929 193 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 RASL11BQ9BPW5 248 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.13□□□□□ -0.95
VARS2-208ENST00000477052 LIN7CQ9NUP9 197 aaKnown RBP9.13□□□□□ -0.95
VARS2-208ENST00000477052 ETAA1Q9NY74 926 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 PSORS1C1Q9UIG5 152 aa9.13□□□□□ -0.95
VARS2-208ENST00000477052 DIMT1Q9UNQ2 313 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms