RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ZSCAN26Q16670 478 aa8.72□□□□□ -1.01
BRCA1-213ENST00000476777 PIGYQ3MUY2 71 aa8.72□□□□□ -1.01
BRCA1-213ENST00000476777 C12orf73Q69YU5 71 aa8.72□□□□□ -1.01
BRCA1-213ENST00000476777 SLC25A48Q6ZT89 311 aaKnown RBP8.72□□□□□ -1.01
BRCA1-213ENST00000476777 FAM220AQ7Z4H9 259 aa8.72□□□□□ -1.01
BRCA1-213ENST00000476777 UBALD1Q8TB05 177 aa8.72□□□□□ -1.01
BRCA1-213ENST00000476777 ARL11Q969Q4 196 aa8.72□□□□□ -1.01
BRCA1-213ENST00000476777 CCDC124Q96CT7 223 aaKnown RBP8.72□□□□□ -1.01
BRCA1-213ENST00000476777 RITA1Q96K30 269 aa8.72□□□□□ -1.01
BRCA1-213ENST00000476777 DPCDQ9BVM2 203 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-213ENST00000476777 PARP11Q9NR21 331 aa8.72□□□□□ -1.01
BRCA1-213ENST00000476777 ZNF446Q9NWS9 450 aa8.72□□□□□ -1.01
BRCA1-213ENST00000476777 AQP12BA6NM10 295 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 ZAR1LA6NP61 321 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 FAM107AO95990 144 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 BLVRBP30043 206 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-213ENST00000476777 ZNF134P52741 427 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 LSAMPQ13449 338 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 Q3ZCU0 254 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 C19orf54Q5BKX5 351 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 ZNF691Q5VV52 312 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 FDX2Q6P4F2 183 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 AQP12AQ8IXF9 295 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 SUMF2Q8NBJ7 301 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 ZNF439Q8NDP4 499 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 PXT1Q8NFP0 134 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 OR13C3Q8NGS6 347 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 CASTOR1Q8WTX7 329 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 NRBF2Q96F24 287 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 ANKRD60Q9BZ19 345 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 STUB1Q9UNE7 303 aa8.71□□□□□ -1.02
BRCA1-213ENST00000476777 TMEM30CPA0ZSE6 113 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 C12orf77C9JDV5 145 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 ORC5O43913 435 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 HSPB1P04792 205 aaKnown RBP8.7□□□□□ -1.02
BRCA1-213ENST00000476777 HOXB6P17509 224 aaKnown RBP8.7□□□□□ -1.02
BRCA1-213ENST00000476777 CNTFRP26992 372 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 ATP6V1E1P36543 226 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 ACTBP60709 375 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 NDPQ00604 133 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 CT45A1Q5HYN5 189 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 ANKRD13BQ86YJ7 626 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 OR10K1Q8NGX5 313 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 CT45A3Q8NHU0 189 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 LINC00476Q8WZB0 136 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 FLYWCH2Q96CP2 140 aaKnown RBP8.7□□□□□ -1.02
BRCA1-213ENST00000476777 ELOVL1Q9BW60 279 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 IFT22Q9H7X7 185 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 RETNQ9HD89 108 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 FBXO7Q9Y3I1 522 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 DNAH10Q8IVF4 4471 aa8.7□□□□□ -1.02
BRCA1-213ENST00000476777 A0A1W2PN81 502 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 OR4C45A6NMZ5 311 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 SULT1B1O43704 296 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 LANCL1O43813 399 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 FKBP6O75344 327 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 IGHV3-11P01762 117 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 CHRNA7P36544 502 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 CCR9P51686 369 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 CRIP2P52943 208 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-213ENST00000476777 ECSCRQ19T08 205 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 C5orf64Q2M2E5 130 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 LPCAT4Q643R3 524 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 LIN54Q6MZP7 749 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 OR5D14Q8NGL3 314 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 CCDC107Q8WV48 283 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 THAP7Q9BT49 309 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-213ENST00000476777 RSRP1Q9BUV0 290 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 HIPK2Q9H2X6 1198 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 FOXA2Q9Y261 457 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-213ENST00000476777 ARL2BPQ9Y2Y0 163 aa8.69□□□□□ -1.02
BRCA1-213ENST00000476777 HECTD4Q9Y4D8 3996 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 KIAA1109Q2LD37 5005 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 GABRPO00591 440 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 ARPC1BO15143 372 aaKnown RBP8.68□□□□□ -1.02
BRCA1-213ENST00000476777 NBR2O15453 112 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 DCTN3O75935 186 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 OR7C1O76099 320 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-213ENST00000476777 HTR1AP08908 422 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 SNRPBP14678 240 aaKnown RBP8.68□□□□□ -1.02
BRCA1-213ENST00000476777 TMED1Q13445 227 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 RSU1Q15404 277 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 HSP90B2PQ58FF3 399 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 ASCL4Q6XD76 172 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 KCTD20Q7Z5Y7 419 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 SERPINA12Q8IW75 414 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 PARP16Q8N5Y8 322 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 NPBQ8NG41 125 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 OR10V1Q8NGI7 309 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 TNFAIP8L1Q8WVP5 186 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 NSL1Q96IY1 281 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 FAM110AQ9BQ89 295 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 ZNF251Q9BRH9 671 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 TMED9Q9BVK6 235 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 TUBA4BQ9H853 241 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 GNG12Q9UBI6 72 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 ST3GAL6Q9Y274 331 aa8.68□□□□□ -1.02
BRCA1-213ENST00000476777 SLC16A6O15403 523 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 HTR3BO95264 441 aa8.67□□□□□ -1.02
BRCA1-213ENST00000476777 MT-ND4P03905 459 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms