RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 CALRP27797 417 aaKnown RBP12.98□□□□□ -0.33
COL1A1-205ENST00000476387 MADCAM1Q13477 382 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 NKAPLQ5M9Q1 402 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 UTF1Q5T230 341 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 SYT6Q5T7P8 510 aaPredicted RBP12.98□□□□□ -0.33
COL1A1-205ENST00000476387 TRAT1Q6PIZ9 186 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 TMEM91Q6ZNR0 172 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 C16orf82Q7Z2V1 217 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 C1QL4Q86Z23 238 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 SVOPQ8N4V2 548 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 C11orf44Q8N8P7 122 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 KCNG3Q8TAE7 436 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 ACOT13Q9NPJ3 140 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 UBE2QL1A1L167 161 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 SLC22A1O15245 554 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 SPINT2O43291 252 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 FBXO24O75426 580 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 BPNT1O95861 308 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 VSIG8P0DPA2 414 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 TMEM30BQ3MIR4 351 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 OR10K2Q6IF99 312 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 OR52M1Q8NGK5 317 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 OR4K15Q8NH41 348 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 UBALD1Q8TB05 177 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 WIPF2Q8TF74 440 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-205ENST00000476387 NEDD4LQ96PU5 975 aa12.97□□□□□ -0.33
COL1A1-205ENST00000476387 LY6LH3BQJ8 138 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 C15orf65H3BRN8 121 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 SLC17A2O00624 439 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 PLXNB1O43157 2135 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 MRPS14O60783 128 aaKnown RBP12.96□□□□□ -0.33
COL1A1-205ENST00000476387 PEX14O75381 377 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 CD24P25063 80 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 RANBP1P43487 201 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 RPS27AP62979 156 aaKnown RBP12.96□□□□□ -0.33
COL1A1-205ENST00000476387 FABP5Q01469 135 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 HABP2Q14520 560 aaPredicted RBP12.96□□□□□ -0.33
COL1A1-205ENST00000476387 RAB11BQ15907 218 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 KPRPQ5T749 579 aaPredicted RBP12.96□□□□□ -0.33
COL1A1-205ENST00000476387 SIGIRRQ6IA17 410 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 PRR18Q8N4B5 295 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 SLC25A33Q9BSK2 321 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 WNT10AQ9GZT5 417 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 KCNK15Q9H427 330 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 LIN7BQ9HAP6 207 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 GFOD1Q9NXC2 390 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 KCNIP1Q9NZI2 227 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 GNG12Q9UBI6 72 aa12.96□□□□□ -0.33
COL1A1-205ENST00000476387 AK6Q9Y3D8 172 aaKnown RBP12.96□□□□□ -0.33
COL1A1-205ENST00000476387 IGHV3-43A0A0B4J1X8 118 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 A0A1W2PPE3 182 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 C12orf77C9JDV5 145 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 DENRO43583 198 aaKnown RBP12.95□□□□□ -0.34
COL1A1-205ENST00000476387 IGHV3-43DP0DP04 118 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 ARSBP15848 533 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 IL3RAP26951 378 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 CHATP28329 748 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 RAB7AP51149 207 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 EMX1Q04741 257 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-205ENST00000476387 UNC119Q13432 240 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 P2RY14Q15391 338 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 BEAN1Q3B7T3 259 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 SAMD5Q5TGI4 173 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 NDUFA11Q86Y39 141 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 GAPTQ8N292 157 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 URM1Q9BTM9 101 aaKnown RBP12.95□□□□□ -0.34
COL1A1-205ENST00000476387 NDUFB11Q9NX14 153 aa12.95□□□□□ -0.34
COL1A1-205ENST00000476387 TMEM14DPA8MWL7 114 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 G3V4G9 280 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 OR2F2O95006 317 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 HBZP02008 142 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 FAM106CPP0CH98 169 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 CD28P10747 220 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 CD37P11049 281 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 MYL9P24844 172 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 VDAC2P45880 294 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-205ENST00000476387 PSMD7P51665 324 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 SSX1Q16384 188 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 Q3ZCU0 254 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 HIST2H2BDQ6DRA6 164 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 OR2W3Q7Z3T1 314 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 OR8H3Q8N146 312 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 OR56B4Q8NH76 319 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 GFI1Q99684 422 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 TM2D1Q9BX74 207 aa12.94□□□□□ -0.34
COL1A1-205ENST00000476387 YTHDF1Q9BYJ9 559 aaKnown RBP12.94□□□□□ -0.34
COL1A1-205ENST00000476387 RRP15Q9Y3B9 282 aaKnown RBP12.94□□□□□ -0.34
COL1A1-205ENST00000476387 A0A1W2PPI3 338 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 PDCD5O14737 125 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 HSD17B6O14756 317 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 RCC1P18754 421 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-205ENST00000476387 PSMB9P28065 219 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 BLVRBP30043 206 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-205ENST00000476387 LOXL3P58215 753 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 BLCAPP62952 87 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 QRFPP83859 136 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 HES1Q14469 280 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 NSUN5P1Q3KNT7 163 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 C6orf201Q7Z4U5 140 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 ZNF554Q86TJ5 538 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms