RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	LIN52	Q52LA3	116 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	OR2T2	Q6IF00	324 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	OR8G2P	Q6IF36	304 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	UFSP1	Q6NVU6	142 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	LRRC74B	Q6ZQY2	392 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	RNF165	Q6ZSG1	346 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	NUDCD3	Q8IVD9	361 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	SLC22A9	Q8IVM8	553 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	DYNAP	Q8N1N2	210 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	NATD1	Q8N6N6	113 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	FAM216B	Q8N7L0	139 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	BHLHE23	Q8NDY6	225 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	OR8G5	Q8NG78	346 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	OR52P1P	Q8NH57	321 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	RPL3L	Q92901	407 aa	Known RBP	3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	SLC25A44	Q96H78	314 aa	Predicted RBP	3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	TMEM80	Q96HE8	168 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	ITCH	Q96J02	903 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	P2RX4	Q99571	388 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	ECSIT	Q9BQ95	431 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	TM2D3	Q9BRN9	247 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	ZNF649	Q9BS31	505 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	SIAE	Q9HAT2	523 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	ELOVL3	Q9HB03	270 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	CCNB1IP1	Q9NPC3	277 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	PLSCR3	Q9NRY6	295 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	UFSP2	Q9NUQ7	469 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	TAS2R5	Q9NYW4	299 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	GNG12	Q9UBI6	72 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	ZMAT5	Q9UDW3	170 aa	Known RBP	3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	TBK1	Q9UHD2	729 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	ZNF443	Q9Y2A4	671 aa	Predicted RBP	3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	IGHV3OR15-7	A0A075B7D8	119 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	IGHV3-35	A0A0C4DH35	117 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	VGLL3	A8MV65	326 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	TMEM114	B3SHH9	223 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	AZIN1	O14977	448 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	MAGEB3	O15480	346 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	LYPLA1	O75608	230 aa	Predicted RBP	3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	LY6G6C	O95867	125 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	SERPINE1	P05121	402 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	LAP3	P28838	519 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	CD200	P41217	278 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	ZNF133	P52736	654 aa	Predicted RBP	3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	PLTP	P55058	493 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	CBX1	P83916	185 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	ST3GAL3	Q11203	375 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR8B8	Q15620	311 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	C10orf128	Q5T292	105 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	C5orf46	Q6UWT4	87 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	FBXW12	Q6X9E4	464 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	LRRC34	Q8IZ02	419 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	SLC35F6	Q8N357	371 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	NOXO1	Q8NFA2	376 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR4X2	Q8NGF9	303 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR13G1	Q8NGZ3	307 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR5J2	Q8NH18	312 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	SLC7A6	Q92536	515 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	SLC35A5	Q9BS91	424 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	C12orf10	Q9HB07	376 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	SLCO1B3	Q9NPD5	702 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	NANS	Q9NR45	359 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	KAAG1	Q9UBP8	84 aa		3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	MARCO	Q9UEW3	520 aa	Predicted RBP	3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	MRPS7	Q9Y2R9	242 aa	Known RBP	3.15	□□□□□ -1.91
PRKD3-208	ENST00000475912	TRAV38-1	A0A0B4J264	116 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	IQCF6	A8MYZ5	107 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912		H3BQF6	201 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	RNF13	O43567	381 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	NDUFA2	O43678	99 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	DUSP14	O95147	198 aa	Known RBP	3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	CPSF4	O95639	269 aa	Known RBP	3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	SNRPA	P09012	282 aa	Known RBP	3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	ELK1	P19419	428 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	TUBG1	P23258	451 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	ANP32A	P39687	249 aa	Known RBP	3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	MYCNOS	P40205	109 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	CDKN2C	P42773	168 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	PPT1	P50897	306 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	GBX2	P52951	348 aa	Predicted RBP	3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	RPL23A	P62750	156 aa	Known RBP	3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	ENDOG	Q14249	297 aa	Known RBP	3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	LAGE3	Q14657	143 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	KCNJ8	Q15842	424 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	SGCA	Q16586	387 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	TIGIT	Q495A1	244 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	CFAP157	Q5JU67	520 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	LDLRAD2	Q5SZI1	272 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	FAM27B	Q5VT28	67 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	HHAT	Q5VTY9	493 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	TEX36	Q5VZQ5	186 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	TTC23	Q5W5X9	447 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	C1orf94	Q6P1W5	598 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	C2orf66	Q6UXQ4	117 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	ZYG11A	Q6WRX3	759 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	ZNF826P	Q6ZT77	177 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	OR2W3	Q7Z3T1	314 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	EGFL6	Q8IUX8	553 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	CLDN22	Q8N7P3	220 aa		3.14	□□□□□ -1.91
PRKD3-208	ENST00000475912	FNDC5	Q8NAU1	212 aa		3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms